BLASTX nr result

ID: Coptis25_contig00000042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000042
         (933 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297997.1| predicted protein [Populus trichocarpa] gi|2...   294   2e-77
emb|CBI34419.3| unnamed protein product [Vitis vinifera]              290   4e-76
ref|XP_002272144.1| PREDICTED: disease resistance response prote...   289   6e-76
ref|XP_002509891.1| Disease resistance response protein, putativ...   285   1e-74
ref|XP_002276477.1| PREDICTED: disease resistance response prote...   282   9e-74

>ref|XP_002297997.1| predicted protein [Populus trichocarpa] gi|222845255|gb|EEE82802.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score =  294 bits (752), Expect = 2e-77
 Identities = 139/189 (73%), Positives = 167/189 (88%)
 Frame = +3

Query: 129 MASRSTLVCIVLLFLCLSEASAFLGQKRKQHPRQPCKRLVLYFHDIIYNGKNAENATSAI 308
           M ++  ++ + LLFL LS++SAF  +K + H  +PCKRLV YFHDIIYNGKN++NAT+AI
Sbjct: 1   MEAKRLILALFLLFL-LSKSSAFPSRKSRVH--KPCKRLVFYFHDIIYNGKNSKNATAAI 57

Query: 309 IGAPSWADKIILAGQKHFGDLVVFDDPITLDNNLHASPVGRAQGFYLYDKKEIFTAWIAF 488
           +GAP+W +K ILA Q HFGDLVVFDDPITLDNNLH++PVGRAQG Y+YDKKEIFTAW+ F
Sbjct: 58  VGAPAWGNKTILANQNHFGDLVVFDDPITLDNNLHSAPVGRAQGIYVYDKKEIFTAWLGF 117

Query: 489 SFVLDSKDYKGTINFAGADPLMNKTRDISVIGGTGDFFMSRGIATLMTDAFEGEVYFRLQ 668
           SFV +S ++KG+INFAGADPLMNKTRD+SVIGGTGDF M+RGIATLMTDAFEGEVYFRL+
Sbjct: 118 SFVFNSTEHKGSINFAGADPLMNKTRDVSVIGGTGDFIMARGIATLMTDAFEGEVYFRLR 177

Query: 669 VDIKLYECW 695
           VDI+LYECW
Sbjct: 178 VDIQLYECW 186


>emb|CBI34419.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score =  290 bits (741), Expect = 4e-76
 Identities = 136/194 (70%), Positives = 164/194 (84%), Gaps = 5/194 (2%)
 Frame = +3

Query: 129 MASRSTLVCIVLLFLCLSEASAFLGQKRKQHP-----RQPCKRLVLYFHDIIYNGKNAEN 293
           M +++ +  + L+F+    ++   G  R + P     R+PCKRLV YFHDIIYNG+N+ N
Sbjct: 46  MRAQNLISALFLIFIVFGSSAMGKGPVRGRRPCRSLHRRPCKRLVFYFHDIIYNGQNSHN 105

Query: 294 ATSAIIGAPSWADKIILAGQKHFGDLVVFDDPITLDNNLHASPVGRAQGFYLYDKKEIFT 473
           AT+AI+GAP+WA+  ILAG+ HFGDLVVFDDPITLDNNLH++PVGRAQGFY+YDKK+IFT
Sbjct: 106 ATAAIVGAPAWANTTILAGKNHFGDLVVFDDPITLDNNLHSTPVGRAQGFYIYDKKDIFT 165

Query: 474 AWIAFSFVLDSKDYKGTINFAGADPLMNKTRDISVIGGTGDFFMSRGIATLMTDAFEGEV 653
           AWI FSFV +S  +KG+INFAGADPLMNKTRDISVIGGTGDFFM+RGIATLMTDAFEGEV
Sbjct: 166 AWIGFSFVFNSTYHKGSINFAGADPLMNKTRDISVIGGTGDFFMARGIATLMTDAFEGEV 225

Query: 654 YFRLQVDIKLYECW 695
           YFRL+VD+KLYECW
Sbjct: 226 YFRLRVDVKLYECW 239


>ref|XP_002272144.1| PREDICTED: disease resistance response protein 206-like [Vitis
           vinifera]
          Length = 192

 Score =  289 bits (740), Expect = 6e-76
 Identities = 137/183 (74%), Positives = 161/183 (87%)
 Frame = +3

Query: 147 LVCIVLLFLCLSEASAFLGQKRKQHPRQPCKRLVLYFHDIIYNGKNAENATSAIIGAPSW 326
           L+ ++L+ +  S A+  LG K     R+PCKRLV YFHDIIYNG+N+ NAT+AI+GAP+W
Sbjct: 14  LLLLLLISISTSTATPSLGIKH----RRPCKRLVFYFHDIIYNGQNSHNATAAIVGAPAW 69

Query: 327 ADKIILAGQKHFGDLVVFDDPITLDNNLHASPVGRAQGFYLYDKKEIFTAWIAFSFVLDS 506
           A+  ILAG+ HFGDLVVFDDPITLDNNLH++PVGRAQGFY+YDKK+IFTAWI FSFV +S
Sbjct: 70  ANTTILAGKNHFGDLVVFDDPITLDNNLHSTPVGRAQGFYIYDKKDIFTAWIGFSFVFNS 129

Query: 507 KDYKGTINFAGADPLMNKTRDISVIGGTGDFFMSRGIATLMTDAFEGEVYFRLQVDIKLY 686
             +KG+INFAGADPLMNKTRDISVIGGTGDFFM+RGIATLMTDAFEGEVYFRL+VD+KLY
Sbjct: 130 TYHKGSINFAGADPLMNKTRDISVIGGTGDFFMARGIATLMTDAFEGEVYFRLRVDVKLY 189

Query: 687 ECW 695
           ECW
Sbjct: 190 ECW 192


>ref|XP_002509891.1| Disease resistance response protein, putative [Ricinus communis]
           gi|223549790|gb|EEF51278.1| Disease resistance response
           protein, putative [Ricinus communis]
          Length = 186

 Score =  285 bits (729), Expect = 1e-74
 Identities = 134/177 (75%), Positives = 154/177 (87%)
 Frame = +3

Query: 165 LFLCLSEASAFLGQKRKQHPRQPCKRLVLYFHDIIYNGKNAENATSAIIGAPSWADKIIL 344
           LFL    + ++   KRK    +PCKRL+ YFHDIIYNGKN++NATSAI GAP+WA+K IL
Sbjct: 10  LFLVFLLSKSYALPKRKIPSPKPCKRLIFYFHDIIYNGKNSKNATSAIAGAPAWANKTIL 69

Query: 345 AGQKHFGDLVVFDDPITLDNNLHASPVGRAQGFYLYDKKEIFTAWIAFSFVLDSKDYKGT 524
           A Q HFGD+VVFDDPITLDNNLH++PVGRAQG Y+YDKKEIFTAW+ FSFV +S  +KG+
Sbjct: 70  AKQDHFGDIVVFDDPITLDNNLHSTPVGRAQGIYIYDKKEIFTAWMGFSFVFNSTQHKGS 129

Query: 525 INFAGADPLMNKTRDISVIGGTGDFFMSRGIATLMTDAFEGEVYFRLQVDIKLYECW 695
           I FAGADPLMNKTRD+SVIGGTGDFFM+RGIATLMTDAFEGEVYFRL+VDIKLYECW
Sbjct: 130 ITFAGADPLMNKTRDVSVIGGTGDFFMARGIATLMTDAFEGEVYFRLRVDIKLYECW 186


>ref|XP_002276477.1| PREDICTED: disease resistance response protein 206 [Vitis vinifera]
          Length = 186

 Score =  282 bits (721), Expect = 9e-74
 Identities = 130/189 (68%), Positives = 160/189 (84%)
 Frame = +3

Query: 129 MASRSTLVCIVLLFLCLSEASAFLGQKRKQHPRQPCKRLVLYFHDIIYNGKNAENATSAI 308
           M +++ +  + L+F+    ++   G  R    R+PC+ LV YFHDIIYNGKN++NAT+AI
Sbjct: 1   MRAQNLISALFLIFIVFGSSAMGKGPVRG---RRPCRSLVFYFHDIIYNGKNSKNATAAI 57

Query: 309 IGAPSWADKIILAGQKHFGDLVVFDDPITLDNNLHASPVGRAQGFYLYDKKEIFTAWIAF 488
           +GAP+W +K IL G+ HFGDLVVFDDPITLDNNLH++PVGRAQGFY+YDKK++FTAW+ F
Sbjct: 58  VGAPAWGNKTILGGKNHFGDLVVFDDPITLDNNLHSTPVGRAQGFYIYDKKDVFTAWLGF 117

Query: 489 SFVLDSKDYKGTINFAGADPLMNKTRDISVIGGTGDFFMSRGIATLMTDAFEGEVYFRLQ 668
           SFV +S ++KG+INFAGADPLMNKTRDISV+GGTGDFFM+RGIATL TDAFEGEVYFRL 
Sbjct: 118 SFVFNSTEHKGSINFAGADPLMNKTRDISVVGGTGDFFMARGIATLTTDAFEGEVYFRLC 177

Query: 669 VDIKLYECW 695
           VDIKLYECW
Sbjct: 178 VDIKLYECW 186


Top