BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000017
         (1467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY85734.1| hypothetical protein OsI_07098 [Oryza sativa Indi...    83   2e-13
dbj|BAD19994.1| cytokinin inducibl protein-like [Oryza sativa Ja...    81   6e-13
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati...    81   8e-13
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-...    81   8e-13
ref|XP_003889637.1| hypothetical protein PGTG_21651 [Puccinia gr...    79   3e-12

>gb|EAY85734.1| hypothetical protein OsI_07098 [Oryza sativa Indica Group]
          Length = 242

 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
 Frame = -2

Query: 1250 MESQDTSQSTKG--GTRTRGPSFNYKEDKALTQAWLHVGDDGVVWDEQAGNSFWGRVLGH 1077
            M+++D   ST G  G   R  +FN KED  L  +W  +  D ++ +EQ G ++W R+  H
Sbjct: 14   MQNEDLHTSTNGAKGRAKRSSNFNRKEDIQLCISWQSISSDPIIGNEQPGKAYWQRIAEH 73

Query: 1076 FHIFLGNTTDRNAKGLSVRWSFLQGNIQSFHAILSKLEEHHPSGVSHGNIVELARQAFFV 897
            +H      +DRNA  L  RW  +Q  +  F     ++E  HPSG+ H  +V  A   +  
Sbjct: 74   YHANRDFESDRNAFSLEHRWGNIQKEVSKFQGCYEQIERRHPSGIPHQELVLEAEALYSS 133

Query: 896  N--QKTIWKWQECYDLVKDNLKWK 831
            N  +   +++  C+  ++++ K++
Sbjct: 134  NAPKNRAFQFNHCWLKLRNSPKFQ 157


>dbj|BAD19994.1| cytokinin inducibl protein-like [Oryza sativa Japonica Group]
            gi|47497834|dbj|BAD19931.1| cytokinin inducibl
            protein-like [Oryza sativa Japonica Group]
          Length = 320

 Score = 81.3 bits (199), Expect = 6e-13
 Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
 Frame = -2

Query: 1250 MESQDTSQSTKG--GTRTRGPSFNYKEDKALTQAWLHVGDDGVVWDEQAGNSFWGRVLGH 1077
            M+++D   ST G  G   R  +FN KED  L  +W  +  D ++ +EQ G ++W R+  H
Sbjct: 14   MQNEDLHTSTNGAKGRAKRSSNFNRKEDIQLCISWQSISSDPIIGNEQPGKAYWQRIAEH 73

Query: 1076 FHIFLGNTTDRNAKGLSVRWSFLQGNIQSFHAILSKLEEHHPSGVSHGNIVELARQAFFV 897
            +H      +DRN   L  RW  +Q  +  F     ++E  HPSG+ H  +V  A   +  
Sbjct: 74   YHANRDFESDRNTFSLEHRWGNIQKEVSKFQGCYEQIERRHPSGIPHQELVLEAEALYSS 133

Query: 896  N--QKTIWKWQECYDLVKDNLKWK 831
            N  +   +++  C+  ++++ K++
Sbjct: 134  NAPKNRAFQFNHCWLKLRNSPKFQ 157


>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
          Length = 1739

 Score = 80.9 bits (198), Expect = 8e-13
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
 Frame = -2

Query: 1253 IMESQDTSQSTKG--GTRTRGPSFNYKEDKALTQAWLHVGDDGVVWDEQAGNSFWGRVLG 1080
            +M ++D   ST G  G+  R  ++  KED  L  +W  +  D ++ +EQ G ++W R+  
Sbjct: 21   LMPNEDLRTSTNGAKGSAKRSSNYTRKEDIQLCISWQSISSDPIIGNEQPGKAYWQRIAE 80

Query: 1079 HFHIFLGNTTDRNAKGLSVRWSFLQGNIQSFHAILSKLEEHHPSGVSHGNIV 924
            H+H      +DRNA  L   W  +Q  +  F    +++E HHPSG+ H  +V
Sbjct: 81   HYHANRDFESDRNANSLEHHWGNIQKEVSKFQGCYNQIERHHPSGIPHQELV 132


>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|108864301|gb|ABA93040.2|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1748

 Score = 80.9 bits (198), Expect = 8e-13
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
 Frame = -2

Query: 1253 IMESQDTSQSTKG--GTRTRGPSFNYKEDKALTQAWLHVGDDGVVWDEQAGNSFWGRVLG 1080
            +M ++D   ST G  G+  R  ++  KED  L  +W  +  D ++ +EQ G ++W R+  
Sbjct: 21   LMPNEDLRTSTNGAKGSAKRSSNYTRKEDIQLCISWQSISSDPIIGNEQPGKAYWQRIAE 80

Query: 1079 HFHIFLGNTTDRNAKGLSVRWSFLQGNIQSFHAILSKLEEHHPSGVSHGNIV 924
            H+H      +DRNA  L   W  +Q  +  F    +++E HHPSG+ H  +V
Sbjct: 81   HYHANRDFESDRNANSLEHHWGNIQKEVSKFQGCYNQIERHHPSGIPHQELV 132


>ref|XP_003889637.1| hypothetical protein PGTG_21651 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3] gi|375167959|gb|EHS63548.1| hypothetical
            protein PGTG_21651 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 376

 Score = 79.0 bits (193), Expect = 3e-12
 Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 2/145 (1%)
 Frame = -2

Query: 1262 TSSIMESQDTSQSTKGGTRTRGPSFNYKEDKALTQAWLHVGDDGVVWDEQAGNSFWGRVL 1083
            T S       S+  +G  ++R P++   ED  L  +WL   +DG    +Q G +FWG V 
Sbjct: 78   TQSEAGDDSDSEDEEGEKKSRAPNYQEHEDLQLCTSWLETTEDGRKGTDQTGKAFWGTVT 137

Query: 1082 GHFHIFLGNTTD--RNAKGLSVRWSFLQGNIQSFHAILSKLEEHHPSGVSHGNIVELARQ 909
             H+H      TD  R+ + +  RW  +Q  +  FH  ++++   +PSG +  N + +A  
Sbjct: 138  SHYH---SKITDPKRSIRSIKGRWGLIQHALNKFHGCVNQINHRNPSGTTATNRISMALT 194

Query: 908  AFFVNQKTIWKWQECYDLVKDNLKW 834
             F       + +  CY+L+  + KW
Sbjct: 195  LFTQLHDKPFTYMCCYNLLSTSPKW 219