BLASTX nr result
ID: Coptis25_contig00000015
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00000015
(2001 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281375.1| PREDICTED: bifunctional aminoacyl-tRNA synth... 740 0.0
gb|ABK95302.1| unknown [Populus trichocarpa] 740 0.0
ref|XP_002301553.1| predicted protein [Populus trichocarpa] gi|2... 736 0.0
ref|XP_002515180.1| prolyl-tRNA synthetase, putative [Ricinus co... 736 0.0
ref|XP_003626067.1| Bifunctional aminoacyl-tRNA synthetase [Medi... 733 0.0
>ref|XP_002281375.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase [Vitis vinifera]
gi|297744088|emb|CBI37058.3| unnamed protein product
[Vitis vinifera]
Length = 516
Score = 740 bits (1911), Expect = 0.0
Identities = 343/434 (79%), Positives = 383/434 (88%)
Frame = +3
Query: 246 ETGLALTHKKDENFGEWYSEVVVSSEMIEYYDISGCYILRPWTMSIWEVMQTFFDAEIKK 425
ETGL L++KK+ENFGEWYSEV V+ EMIEYYDISGCYILRPWTM++WE MQTFFDAEIKK
Sbjct: 31 ETGLGLSYKKEENFGEWYSEVCVNGEMIEYYDISGCYILRPWTMAVWETMQTFFDAEIKK 90
Query: 426 MKIKNCYFPVFVSESCLQKEKDHIDGFAAEVAWVTRSGKTELDLPIAIRPTSETVMYPYF 605
MKIKNCYFP+FVS LQKEKDHI+GFA EVAWVT+SG+++L++PIAIRPTSETVMYPY+
Sbjct: 91 MKIKNCYFPLFVSPGVLQKEKDHIEGFAPEVAWVTKSGQSDLEVPIAIRPTSETVMYPYY 150
Query: 606 SKWIRGHRDLPLRLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADKEVLEIL 785
SKWIRGHRDLPLRLNQWCNVVRWEFS+PTPFIRSREFLWQEGHTAFATKEEADKEVLEIL
Sbjct: 151 SKWIRGHRDLPLRLNQWCNVVRWEFSHPTPFIRSREFLWQEGHTAFATKEEADKEVLEIL 210
Query: 786 ELYRRVYEEFLAVPVVKGKKSEKEKFAGGLYTTSVEAFVPNTGRGVQGATSHCLGQNFAK 965
ELYRR+YEE+LA+PV+KGKKSE EKFAGG YTTSVEAF+PNTGRG+QGATSHCLGQNFAK
Sbjct: 211 ELYRRIYEEYLAIPVIKGKKSEMEKFAGGFYTTSVEAFIPNTGRGIQGATSHCLGQNFAK 270
Query: 966 MFDIQYENEKGGRGMVWQNSWAYSTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYK 1145
MFDI +ENEKG + MVWQNSWAYSTRTIGVMVMVHGDDKGLV+ +K
Sbjct: 271 MFDITFENEKGEKAMVWQNSWAYSTRTIGVMVMVHGDDKGLVMPPKVASVQIIVVPVPFK 330
Query: 1146 DADMQAIFDACSTTVKILTEAGFRVEEDLRENYSPGWKYSHWEMKGVPLRIEIGPKDIAN 1325
DAD QAIFDAC TV L EAGFR E DLR+NYSPGWKYSHWEMKGVPLRIEIGPKD+AN
Sbjct: 331 DADTQAIFDACDATVNTLNEAGFRAEADLRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAN 390
Query: 1326 KQVRVVRRDNSSKMDISTGDLAEKIGDILENIQQSLFDAAKEKRDACIKVATAWEEFTTA 1505
KQ R VRRDNS+K+DI +L E++ D+L+NIQQ+LFD AK+KRDACIK W+EF A
Sbjct: 391 KQARAVRRDNSAKIDIPIVNLVEQVKDMLDNIQQNLFDVAKQKRDACIKTVRTWDEFIEA 450
Query: 1506 LNEKKLILAPWCDE 1547
L +KK+ILAPWCDE
Sbjct: 451 LGQKKMILAPWCDE 464
>gb|ABK95302.1| unknown [Populus trichocarpa]
Length = 498
Score = 740 bits (1911), Expect = 0.0
Identities = 342/435 (78%), Positives = 389/435 (89%)
Frame = +3
Query: 246 ETGLALTHKKDENFGEWYSEVVVSSEMIEYYDISGCYILRPWTMSIWEVMQTFFDAEIKK 425
ETGL L+ KK+ENFGEWYSEVVV+ EMIEYYDISGCYILRPW MSIWE+MQ FFDAEIKK
Sbjct: 12 ETGLGLSFKKEENFGEWYSEVVVNGEMIEYYDISGCYILRPWAMSIWEIMQVFFDAEIKK 71
Query: 426 MKIKNCYFPVFVSESCLQKEKDHIDGFAAEVAWVTRSGKTELDLPIAIRPTSETVMYPYF 605
MKIKNCYFP+FVS S L+KEKDHI+GFA EVAWVT+SGK++L++PIAIRPTSETVMYPYF
Sbjct: 72 MKIKNCYFPLFVSSSVLEKEKDHIEGFAPEVAWVTKSGKSDLEIPIAIRPTSETVMYPYF 131
Query: 606 SKWIRGHRDLPLRLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADKEVLEIL 785
SKWIRGHRDLPL+LNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATK+EAD+EVL+IL
Sbjct: 132 SKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKQEADEEVLQIL 191
Query: 786 ELYRRVYEEFLAVPVVKGKKSEKEKFAGGLYTTSVEAFVPNTGRGVQGATSHCLGQNFAK 965
ELYRR+YEEFLA+P++KGKKSE EKFAGGLYTTSVEAF+PNTGRG+QGATSHCLGQNFAK
Sbjct: 192 ELYRRIYEEFLAIPIIKGKKSEMEKFAGGLYTTSVEAFIPNTGRGIQGATSHCLGQNFAK 251
Query: 966 MFDIQYENEKGGRGMVWQNSWAYSTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYK 1145
MF+I +ENEKG +GM WQNSWAYSTRTIGVMVMVHGDDKGLVL +K
Sbjct: 252 MFEINFENEKGEKGMAWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVSSVQVIVVPVPFK 311
Query: 1146 DADMQAIFDACSTTVKILTEAGFRVEEDLRENYSPGWKYSHWEMKGVPLRIEIGPKDIAN 1325
DA+ Q IFDAC+ TV L EAG R E D RENYSPGWKYSHWEMKGVPLRIEIGPKD+AN
Sbjct: 312 DANTQGIFDACAATVDTLCEAGIRAEADYRENYSPGWKYSHWEMKGVPLRIEIGPKDLAN 371
Query: 1326 KQVRVVRRDNSSKMDISTGDLAEKIGDILENIQQSLFDAAKEKRDACIKVATAWEEFTTA 1505
QVR VRRDN++K+DIS +LAEK+ D+L++IQ+S+FDAAK+KRDACI+VA W+EF A
Sbjct: 372 NQVRAVRRDNAAKVDISCDNLAEKVKDMLDDIQKSMFDAAKQKRDACIQVAKTWDEFKEA 431
Query: 1506 LNEKKLILAPWCDEK 1550
L+++K+ILAPWCDE+
Sbjct: 432 LSQRKMILAPWCDEE 446
>ref|XP_002301553.1| predicted protein [Populus trichocarpa] gi|222843279|gb|EEE80826.1|
predicted protein [Populus trichocarpa]
Length = 498
Score = 736 bits (1901), Expect = 0.0
Identities = 342/435 (78%), Positives = 383/435 (88%)
Frame = +3
Query: 246 ETGLALTHKKDENFGEWYSEVVVSSEMIEYYDISGCYILRPWTMSIWEVMQTFFDAEIKK 425
ETGL LT KK+ENFGEWYSEVVV+ EMIEYYDISGCYILRPW+MSIWE MQ FFD EIKK
Sbjct: 12 ETGLGLTFKKEENFGEWYSEVVVNGEMIEYYDISGCYILRPWSMSIWETMQAFFDVEIKK 71
Query: 426 MKIKNCYFPVFVSESCLQKEKDHIDGFAAEVAWVTRSGKTELDLPIAIRPTSETVMYPYF 605
MKIKNCYFP+FVS S LQKEKDHI+GFA EVAWVT++GK++L++P+AIRPTSETVMYPYF
Sbjct: 72 MKIKNCYFPLFVSSSVLQKEKDHIEGFAPEVAWVTKAGKSDLEVPVAIRPTSETVMYPYF 131
Query: 606 SKWIRGHRDLPLRLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADKEVLEIL 785
SKWIRGHRDLPL+LNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFA+K+EAD+EVL+IL
Sbjct: 132 SKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFASKQEADEEVLQIL 191
Query: 786 ELYRRVYEEFLAVPVVKGKKSEKEKFAGGLYTTSVEAFVPNTGRGVQGATSHCLGQNFAK 965
ELYRR+YEEFLA+PV+KGKKSE EKFAGGLYTTSVEAF+PNTGRG+QGATSHCLGQNFAK
Sbjct: 192 ELYRRIYEEFLAIPVIKGKKSEMEKFAGGLYTTSVEAFIPNTGRGIQGATSHCLGQNFAK 251
Query: 966 MFDIQYENEKGGRGMVWQNSWAYSTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYK 1145
MF+I +ENEKG +GM WQNSWAYSTRTIGVMVMVHGDDKGLVL YK
Sbjct: 252 MFEINFENEKGEKGMAWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVASVQVIVVPVPYK 311
Query: 1146 DADMQAIFDACSTTVKILTEAGFRVEEDLRENYSPGWKYSHWEMKGVPLRIEIGPKDIAN 1325
DAD Q IFDAC+ TV L EAG R E D RENYSPGWKYSHWEMKGVPLRIEIGPKD+AN
Sbjct: 312 DADTQGIFDACAATVDTLCEAGIRAEADFRENYSPGWKYSHWEMKGVPLRIEIGPKDLAN 371
Query: 1326 KQVRVVRRDNSSKMDISTGDLAEKIGDILENIQQSLFDAAKEKRDACIKVATAWEEFTTA 1505
QVR VRRDN++K+DIS L EK+ D+L++IQQ LFDAAK+KRDACI+V W EF A
Sbjct: 372 NQVRAVRRDNAAKVDISRDSLMEKVKDMLDDIQQRLFDAAKQKRDACIQVVKTWGEFKEA 431
Query: 1506 LNEKKLILAPWCDEK 1550
L+++K+ILAPWCDE+
Sbjct: 432 LSQRKMILAPWCDEE 446
>ref|XP_002515180.1| prolyl-tRNA synthetase, putative [Ricinus communis]
gi|223545660|gb|EEF47164.1| prolyl-tRNA synthetase,
putative [Ricinus communis]
Length = 501
Score = 736 bits (1900), Expect = 0.0
Identities = 344/435 (79%), Positives = 386/435 (88%)
Frame = +3
Query: 246 ETGLALTHKKDENFGEWYSEVVVSSEMIEYYDISGCYILRPWTMSIWEVMQTFFDAEIKK 425
ETGL L+ KK+E FGEWYS+VVVS EMIEYYDISGCYILRPW MSIWEVMQTFFDAEIKK
Sbjct: 15 ETGLGLSFKKEEQFGEWYSDVVVSGEMIEYYDISGCYILRPWAMSIWEVMQTFFDAEIKK 74
Query: 426 MKIKNCYFPVFVSESCLQKEKDHIDGFAAEVAWVTRSGKTELDLPIAIRPTSETVMYPYF 605
MKIKNCYFP+FVS S L+KEKDHI+GFA EVAWVT+SGK++L++PIAIRPTSETVMYPY+
Sbjct: 75 MKIKNCYFPLFVSSSVLEKEKDHIEGFAPEVAWVTKSGKSDLEIPIAIRPTSETVMYPYY 134
Query: 606 SKWIRGHRDLPLRLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADKEVLEIL 785
SKWIRGHRDLPL+LNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEAD+EVL+IL
Sbjct: 135 SKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADEEVLQIL 194
Query: 786 ELYRRVYEEFLAVPVVKGKKSEKEKFAGGLYTTSVEAFVPNTGRGVQGATSHCLGQNFAK 965
ELYR +YEEFLAVPVVKGKKSE+EKFAGGLYTTSVEAF+PNTGRG+QGATSHCLGQNFAK
Sbjct: 195 ELYRCIYEEFLAVPVVKGKKSEREKFAGGLYTTSVEAFIPNTGRGIQGATSHCLGQNFAK 254
Query: 966 MFDIQYENEKGGRGMVWQNSWAYSTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYK 1145
MF+I +ENEKG +GMVWQNSWAYSTRTIGVMVMVHGDDKGLVL YK
Sbjct: 255 MFEINFENEKGEKGMVWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVASVQVIVIPVPYK 314
Query: 1146 DADMQAIFDACSTTVKILTEAGFRVEEDLRENYSPGWKYSHWEMKGVPLRIEIGPKDIAN 1325
DAD Q IFDAC+ TV L + G R E D R+NYSPGWKYSHWE+KGVPLRIEIGPKD+AN
Sbjct: 315 DADTQGIFDACTETVDALCKVGIRAESDFRDNYSPGWKYSHWEVKGVPLRIEIGPKDLAN 374
Query: 1326 KQVRVVRRDNSSKMDISTGDLAEKIGDILENIQQSLFDAAKEKRDACIKVATAWEEFTTA 1505
QVR VRRDN++K DIS +L E++ +IL+ IQQSLFDAAK+KRDACI+V W+EFT A
Sbjct: 375 NQVRTVRRDNATKKDISRVNLVEQVKEILDAIQQSLFDAAKQKRDACIQVVRTWDEFTEA 434
Query: 1506 LNEKKLILAPWCDEK 1550
L+++K+ILAPWCDE+
Sbjct: 435 LSQRKMILAPWCDEE 449
>ref|XP_003626067.1| Bifunctional aminoacyl-tRNA synthetase [Medicago truncatula]
gi|355501082|gb|AES82285.1| Bifunctional aminoacyl-tRNA
synthetase [Medicago truncatula]
Length = 529
Score = 733 bits (1892), Expect = 0.0
Identities = 342/435 (78%), Positives = 381/435 (87%)
Frame = +3
Query: 246 ETGLALTHKKDENFGEWYSEVVVSSEMIEYYDISGCYILRPWTMSIWEVMQTFFDAEIKK 425
ETGL LT+KK ENFGEWYSEVVV+ EMIEYYDISGCYILRPW+M+IWE+MQ FFD EIKK
Sbjct: 43 ETGLGLTNKKAENFGEWYSEVVVNGEMIEYYDISGCYILRPWSMAIWEIMQAFFDPEIKK 102
Query: 426 MKIKNCYFPVFVSESCLQKEKDHIDGFAAEVAWVTRSGKTELDLPIAIRPTSETVMYPYF 605
MKIKNCYFP+FVS + L+KEKDHI+GFA EVAWVT+SG+++L++PIAIRPTSETVMYPY+
Sbjct: 103 MKIKNCYFPLFVSNTVLEKEKDHIEGFAPEVAWVTKSGESDLEIPIAIRPTSETVMYPYY 162
Query: 606 SKWIRGHRDLPLRLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADKEVLEIL 785
SKWIRGHRDLPL+LNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEAD EVLEIL
Sbjct: 163 SKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADTEVLEIL 222
Query: 786 ELYRRVYEEFLAVPVVKGKKSEKEKFAGGLYTTSVEAFVPNTGRGVQGATSHCLGQNFAK 965
ELYRR+YEE+LAVPVVKGKKSE EKFAGGLYTTSVEAF+PNTGRG+QGATSHCLGQNFAK
Sbjct: 223 ELYRRIYEEYLAVPVVKGKKSELEKFAGGLYTTSVEAFIPNTGRGIQGATSHCLGQNFAK 282
Query: 966 MFDIQYENEKGGRGMVWQNSWAYSTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXXYK 1145
MF+I YENEKG + MVWQNSWAYSTRTIGVMVMVHGDDKGLVL YK
Sbjct: 283 MFEINYENEKGEKAMVWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVASVQVIVIPVPYK 342
Query: 1146 DADMQAIFDACSTTVKILTEAGFRVEEDLRENYSPGWKYSHWEMKGVPLRIEIGPKDIAN 1325
DAD Q IFDAC+ TV +L EAG R E D R+NYSPGWKYS WEMKGVPLRIEIGPKD+AN
Sbjct: 343 DADTQGIFDACTATVNMLLEAGIRAESDARDNYSPGWKYSQWEMKGVPLRIEIGPKDLAN 402
Query: 1326 KQVRVVRRDNSSKMDISTGDLAEKIGDILENIQQSLFDAAKEKRDACIKVATAWEEFTTA 1505
KQVR VRRD+ +K+DI DL +I +L+NIQQ+LFD AK KRDACI++ W+EF A
Sbjct: 403 KQVRAVRRDSGAKIDIGNDDLVVEIKKLLDNIQQNLFDVAKHKRDACIQIIHTWDEFVAA 462
Query: 1506 LNEKKLILAPWCDEK 1550
LNEKK+ILAPWCDE+
Sbjct: 463 LNEKKMILAPWCDEE 477