BLASTX nr result

ID: Coptis24_contig00039986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039986
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284785.1| PREDICTED: ripening-related bZIP protein-lik...    60   2e-07
gb|ADL70202.1| ABRE binding factor [Solanum tuberosum]                 58   7e-07
gb|ADM53098.1| ABA responsive element binding factor [Citrus tri...    57   1e-06
ref|XP_002518757.1| DNA binding protein, putative [Ricinus commu...    57   2e-06
ref|XP_002510209.1| DNA binding protein, putative [Ricinus commu...    57   2e-06

>ref|XP_002284785.1| PREDICTED: ripening-related bZIP protein-like isoform 1 [Vitis
           vinifera] gi|7406677|emb|CAB85632.1| putative
           ripening-related bZIP protein [Vitis vinifera]
          Length = 447

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/97 (36%), Positives = 51/97 (52%)
 Frame = +3

Query: 3   TLGEVTLEEFLIRAGVVKEDSQIAGRRESNGYSDKLLKSNGNTSLSLRFGRANEINTXXX 182
           TLGE+TLEEFL+RAGVV+ED+Q+AG+  + G+   L        L + F +  + NT   
Sbjct: 146 TLGEMTLEEFLVRAGVVREDTQLAGKPNNGGFFGDLANLGNGNGLGIAFQQMGQ-NTGLM 204

Query: 183 XXXXXXXXXXXXXXXXXXLAVSLNGVISSQQQQKNHQ 293
                             L +++NGV S+QQQ +  Q
Sbjct: 205 GNPRITESNNQISTQSPILPLNVNGVRSTQQQPQQLQ 241


>gb|ADL70202.1| ABRE binding factor [Solanum tuberosum]
          Length = 453

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
 Frame = +3

Query: 3   TLGEVTLEEFLIRAGVVKEDSQIAGR-RESNGYSDKLLKSNGNTSLSLRFGRANEINTXX 179
           T GE+TLEEFL+RAGVV+ED+Q A +   + G    L  +  NT L+  + +AN  NT  
Sbjct: 149 TFGEITLEEFLVRAGVVREDAQFAAKSNNTGGIFGDLSYAGNNTGLAFGYQQANNRNT-G 207

Query: 180 XXXXXXXXXXXXXXXXXXXLAVSLNGVISSQQQ------QKNHQ 293
                              L +++NGV S+QQQ      Q+NHQ
Sbjct: 208 LMAGSIPNKNGETVIQTANLPLNVNGVRSTQQQLRPQQLQQNHQ 251


>gb|ADM53098.1| ABA responsive element binding factor [Citrus trifoliata]
          Length = 448

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
 Frame = +3

Query: 3   TLGEVTLEEFLIRAGVVKEDS-QIAGRRESNGYSDKLLKSNGNTSLSLRFGRANEINTXX 179
           TLGE+TLEEFL+RAGVV+ED+ QI G   ++G+      +N NTSL+L F + +  N   
Sbjct: 137 TLGEMTLEEFLVRAGVVREDAQQIGGSLNNDGF-----YANNNTSLALGFQQPSRNN--G 189

Query: 180 XXXXXXXXXXXXXXXXXXXLAVSLNGVISSQQQQKNHQ 293
                              LA+++NGV SSQQ Q+  Q
Sbjct: 190 LIGNRIMGDGSSVPNQPPNLALNVNGVRSSQQPQQQPQ 227


>ref|XP_002518757.1| DNA binding protein, putative [Ricinus communis]
           gi|223542138|gb|EEF43682.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 433

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 4/60 (6%)
 Frame = +3

Query: 3   TLGEVTLEEFLIRAGVVKEDSQIAGRRESNGYSDKLLK----SNGNTSLSLRFGRANEIN 170
           TLGE+TLEEFL +AGVV+ED+Q+ GR  + G+ D+L +    +N N+ L L F + N  N
Sbjct: 139 TLGEMTLEEFLAKAGVVREDTQLIGRPNNGGFFDELSRLKNANNNNSGLPLEFQQPNRNN 198


>ref|XP_002510209.1| DNA binding protein, putative [Ricinus communis]
           gi|223550910|gb|EEF52396.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 422

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
 Frame = +3

Query: 3   TLGEVTLEEFLIRAGVVKEDSQIAGRRESN-GYSDKLLKSNGNTSLSLRFGRANEINTXX 179
           TLGE+TLEEFL+RAGVV+ED+Q+A +  +N G+     +S  N SL + F +   +    
Sbjct: 136 TLGEMTLEEFLVRAGVVREDAQLAAKVNTNGGFFGDFSRSGNNASLGIGFQQNRVLGLNI 195

Query: 180 XXXXXXXXXXXXXXXXXXXLAVSLNGVISSQ---QQQKNHQ 293
                              L +++NGV S+Q   QQQ+  Q
Sbjct: 196 NNGNNNNSNTNQISLQSSNLPLNVNGVRSNQANIQQQQQQQ 236


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