BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039985
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283354.1| PREDICTED: pentatricopeptide repeat-containi...   134   8e-30
emb|CAN70487.1| hypothetical protein VITISV_008663 [Vitis vinifera]   134   8e-30
ref|XP_002309680.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_002515415.1| pentatricopeptide repeat-containing protein,...   125   3e-27
ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containi...   108   4e-22

>ref|XP_002283354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
          Length = 517

 Score =  134 bits (337), Expect = 8e-30
 Identities = 62/105 (59%), Positives = 80/105 (76%)
 Frame = -1

Query: 317 VDLLGRAGFLKNAFRLIETMPFEPGPTVWGALLGACVIHRDIEVGDIIAKRFAARIECLS 138
           VDLLGRAGFL  AF+LI+ MPFEPG ++ GALLGACVIH+D+E G+ +     ++   +S
Sbjct: 392 VDLLGRAGFLDPAFQLIKAMPFEPGESILGALLGACVIHQDLETGEKVINLITSKAHHVS 451

Query: 137 DGEYVMLANLYASCGRWDEANRWRAMMHDLDINKTSGNSMIEVNG 3
           DGE++M  NLYASCG+W EANRWR  M++  I KT+G S IEV+G
Sbjct: 452 DGEFMMFVNLYASCGQWKEANRWRERMNESGIAKTAGGSTIEVDG 496


>emb|CAN70487.1| hypothetical protein VITISV_008663 [Vitis vinifera]
          Length = 1302

 Score =  134 bits (337), Expect = 8e-30
 Identities = 62/105 (59%), Positives = 80/105 (76%)
 Frame = -1

Query: 317  VDLLGRAGFLKNAFRLIETMPFEPGPTVWGALLGACVIHRDIEVGDIIAKRFAARIECLS 138
            VDLLGRAGFL  AF+LI+ MPFEPG ++ GALLGACVIH+D+E G+ +     ++   +S
Sbjct: 1177 VDLLGRAGFLDPAFQLIKAMPFEPGESILGALLGACVIHQDLETGEKVIBLITSKAHHVS 1236

Query: 137  DGEYVMLANLYASCGRWDEANRWRAMMHDLDINKTSGNSMIEVNG 3
            DGE++M  NLYASCG+W EANRWR  M++  I KT+G S IEV+G
Sbjct: 1237 DGEFMMFVNLYASCGQWKEANRWRERMNESGIAKTAGGSTIEVDG 1281


>ref|XP_002309680.1| predicted protein [Populus trichocarpa] gi|222855656|gb|EEE93203.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score =  129 bits (325), Expect = 2e-28
 Identities = 60/105 (57%), Positives = 81/105 (77%)
 Frame = -1

Query: 317 VDLLGRAGFLKNAFRLIETMPFEPGPTVWGALLGACVIHRDIEVGDIIAKRFAARIECLS 138
           VDLL RA  L  A +LI+TMPF+PG  + GALL AC++H+D+EVG+ + K  ++R   LS
Sbjct: 388 VDLLSRARHLDCALQLIKTMPFKPGEAILGALLSACIVHQDLEVGERVVKLVSSRGNYLS 447

Query: 137 DGEYVMLANLYASCGRWDEANRWRAMMHDLDINKTSGNSMIEVNG 3
           DGE +M +NLYASCG+W+EAN+WR MM+D  I KT+G S++EVNG
Sbjct: 448 DGELMMFSNLYASCGQWEEANKWREMMNDTGIVKTAGFSVVEVNG 492


>ref|XP_002515415.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545359|gb|EEF46864.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/105 (55%), Positives = 80/105 (76%)
 Frame = -1

Query: 317 VDLLGRAGFLKNAFRLIETMPFEPGPTVWGALLGACVIHRDIEVGDIIAKRFAARIECLS 138
           V+LLGR+G L  A ++IETMPFEPG ++ GALL AC+I++D+E G+ + +   ++   LS
Sbjct: 388 VNLLGRSGHLALALQVIETMPFEPGESILGALLSACIIYQDLETGERVIELVCSKAHYLS 447

Query: 137 DGEYVMLANLYASCGRWDEANRWRAMMHDLDINKTSGNSMIEVNG 3
           DGE +M +NLYASCG W+EANRWR MM+   I KT+G S+IEV+G
Sbjct: 448 DGELMMFSNLYASCGNWEEANRWREMMNSTGIVKTAGYSVIEVSG 492


>ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Glycine max]
          Length = 666

 Score =  108 bits (271), Expect = 4e-22
 Identities = 52/103 (50%), Positives = 74/103 (71%)
 Frame = -1

Query: 317 VDLLGRAGFLKNAFRLIETMPFEPGPTVWGALLGACVIHRDIEVGDIIAKRFAARIECLS 138
           +DLLGRAG L +A+ LI TMP  P   VWGALLGACVIH ++E+G+ +A R+  ++E  +
Sbjct: 562 IDLLGRAGRLNDAYNLIRTMPITPNHAVWGALLGACVIHENVELGE-VAARWTFKLEPEN 620

Query: 137 DGEYVMLANLYASCGRWDEANRWRAMMHDLDINKTSGNSMIEV 9
            G YV+LA LYA+ GRW +A R R M++++ + K   +S+IEV
Sbjct: 621 TGNYVLLAKLYAAVGRWGDAERVRDMVNEVGLRKLPAHSLIEV 663