BLASTX nr result

ID: Coptis24_contig00039981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039981
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA20411.1| B-type cyclin [Catharanthus roseus]                   129   2e-28
gb|AAD31791.1|AF126108_1 mitotic cyclin B1-4 [Lupinus luteus] gi...   129   2e-28
gb|AAC61888.1| cyclin [Lupinus luteus] gi|4884726|gb|AAD31789.1|...   127   9e-28
ref|XP_002308872.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28
gb|AFK34233.1| unknown [Lotus japonicus]                              126   2e-27

>dbj|BAA20411.1| B-type cyclin [Catharanthus roseus]
          Length = 436

 Score =  129 bits (325), Expect = 2e-28
 Identities = 60/82 (73%), Positives = 71/82 (86%)
 Frame = +2

Query: 62  TLTSVLTARSKAACGLTNKAKDPVVDIDAADVENQLAAVEYVEDLYKFYRLAENTSRIHE 241
           TLTS LTARSKAACGL+ K KD ++DIDAAD +N+LA VEYVED+YKFY++AEN SR+H 
Sbjct: 143 TLTSTLTARSKAACGLSKKPKDQIIDIDAADADNELAVVEYVEDIYKFYKIAENESRVHN 202

Query: 242 YMDL*PDINVKMRAILVDWLIE 307
           YMD  P+IN KMRAIL+DWLIE
Sbjct: 203 YMDSQPEINDKMRAILIDWLIE 224


>gb|AAD31791.1|AF126108_1 mitotic cyclin B1-4 [Lupinus luteus] gi|3253103|gb|AAC24245.1|
           cyclin CycB1d-ll [Lupinus luteus]
          Length = 452

 Score =  129 bits (324), Expect = 2e-28
 Identities = 62/81 (76%), Positives = 71/81 (87%)
 Frame = +2

Query: 62  TLTSVLTARSKAACGLTNKAKDPVVDIDAADVENQLAAVEYVEDLYKFYRLAENTSRIHE 241
           TLTSVLTARSKAACGLTNK K+ ++DIDA D  N+LAAVEY+ED+YKFY+LAEN +R H+
Sbjct: 146 TLTSVLTARSKAACGLTNKPKEKIIDIDAGDSGNELAAVEYIEDIYKFYKLAENENRPHQ 205

Query: 242 YMDL*PDINVKMRAILVDWLI 304
           YMD  PDIN KMRAILVDWLI
Sbjct: 206 YMDSQPDINEKMRAILVDWLI 226


>gb|AAC61888.1| cyclin [Lupinus luteus] gi|4884726|gb|AAD31789.1| mitotic cyclin
           B1-2 [Lupinus luteus]
          Length = 454

 Score =  127 bits (319), Expect = 9e-28
 Identities = 60/82 (73%), Positives = 71/82 (86%)
 Frame = +2

Query: 62  TLTSVLTARSKAACGLTNKAKDPVVDIDAADVENQLAAVEYVEDLYKFYRLAENTSRIHE 241
           TLTSVLTARSKAACGLT K KD ++DIDA D  N+LAAVEY+ED+YKFY+LAEN +R H+
Sbjct: 154 TLTSVLTARSKAACGLTEKPKDQIIDIDAGDSRNELAAVEYIEDMYKFYKLAENENRPHQ 213

Query: 242 YMDL*PDINVKMRAILVDWLIE 307
           YMD  P+IN +MRAILVDWLI+
Sbjct: 214 YMDSQPEINERMRAILVDWLID 235


>ref|XP_002308872.1| predicted protein [Populus trichocarpa] gi|222854848|gb|EEE92395.1|
           predicted protein [Populus trichocarpa]
          Length = 457

 Score =  127 bits (319), Expect = 9e-28
 Identities = 62/102 (60%), Positives = 75/102 (73%)
 Frame = +2

Query: 2   KERPEXXXXXXXXXXXXXXVTLTSVLTARSKAACGLTNKAKDPVVDIDAADVENQLAAVE 181
           +E+PE               TLTSVLTARSKAACG+ NK K+ ++DIDAADV N LA VE
Sbjct: 140 QEKPEKKKKEGEGSTKKNKPTLTSVLTARSKAACGIANKLKEQIIDIDAADVNNDLAGVE 199

Query: 182 YVEDLYKFYRLAENTSRIHEYMDL*PDINVKMRAILVDWLIE 307
           YVED+YKFY+L EN SR + YMD+ P+IN KMRAILVDWL++
Sbjct: 200 YVEDIYKFYKLVENESRPNNYMDMQPEINEKMRAILVDWLVD 241


>gb|AFK34233.1| unknown [Lotus japonicus]
          Length = 447

 Score =  126 bits (317), Expect = 2e-27
 Identities = 61/82 (74%), Positives = 72/82 (87%)
 Frame = +2

Query: 62  TLTSVLTARSKAACGLTNKAKDPVVDIDAADVENQLAAVEYVEDLYKFYRLAENTSRIHE 241
           TLTSVLTARSKAACGLTNK K+ +VDIDA+DV+N+LAAVEY+ED+YKFY++ EN SR H 
Sbjct: 150 TLTSVLTARSKAACGLTNKPKEEIVDIDASDVDNELAAVEYIEDIYKFYKMVENESRPHC 209

Query: 242 YMDL*PDINVKMRAILVDWLIE 307
           YM   P+IN KMRAILVDWLI+
Sbjct: 210 YMASQPEINEKMRAILVDWLID 231


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