BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039973
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat...    89   3e-16
emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]    89   3e-16
ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat...    88   6e-16
emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]    88   6e-16
ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat...    87   1e-15

>ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 51/124 (41%), Positives = 80/124 (64%), Gaps = 1/124 (0%)
 Frame = +3

Query: 12  YTILIDGLCKSGNLTAAKELFHSITEAGVAPNVVMYNVLIRGLCLGGLLAEANELHLEME 191
           YTI+IDG+C++G L AA++LF +++  G+ PNV  Y ++I GLC  GLLAEA++L  EM+
Sbjct: 447 YTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMK 506

Query: 192 KKGIN-GDFTYSLQFDSSTVLQKNDIFKACLHLREMAKCDFSPENSTEPMLVELYSALND 368
           +KG +    TY+L   +   L+ N+  +    L+EM    FS + ST  +LVE+   L+D
Sbjct: 507 RKGYSPNGCTYNL--ITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEM---LSD 561

Query: 369 ESID 380
           + +D
Sbjct: 562 DGLD 565


>emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 51/124 (41%), Positives = 80/124 (64%), Gaps = 1/124 (0%)
 Frame = +3

Query: 12  YTILIDGLCKSGNLTAAKELFHSITEAGVAPNVVMYNVLIRGLCLGGLLAEANELHLEME 191
           YTI+IDG+C++G L AA++LF +++  G+ PNV  Y ++I GLC  GLLAEA++L  EM+
Sbjct: 456 YTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMK 515

Query: 192 KKGIN-GDFTYSLQFDSSTVLQKNDIFKACLHLREMAKCDFSPENSTEPMLVELYSALND 368
           +KG +    TY+L   +   L+ N+  +    L+EM    FS + ST  +LVE+   L+D
Sbjct: 516 RKGYSPNGCTYNL--ITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEM---LSD 570

Query: 369 ESID 380
           + +D
Sbjct: 571 DGLD 574


>ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 50/124 (40%), Positives = 78/124 (62%), Gaps = 1/124 (0%)
 Frame = +3

Query: 12  YTILIDGLCKSGNLTAAKELFHSITEAGVAPNVVMYNVLIRGLCLGGLLAEANELHLEME 191
           YTI+IDG+C++G L AA+++F +++  G+ PNV  Y ++I GLC  GLL EAN+L +EM+
Sbjct: 456 YTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMD 515

Query: 192 KKGINGD-FTYSLQFDSSTVLQKNDIFKACLHLREMAKCDFSPENSTEPMLVELYSALND 368
             G + D  TY+    +  +LQ  +  +A   L+EM    FS + ST  +LVE+   L D
Sbjct: 516 GNGCSPDGCTYNT--ITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEM---LCD 570

Query: 369 ESID 380
           + +D
Sbjct: 571 DKLD 574



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
 Frame = +3

Query: 3   VITYTILIDGLCKSGNLTAAKELFHSITEAGVAPNVVMYNVLIRGLCLGGLLAEANELHL 182
           V+TY  LI+GLCK GN  AA  L  S+ +    P+VV+Y  +I  LC    + EA  L  
Sbjct: 174 VVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFS 233

Query: 183 EMEKKGINGD-FTYS 224
           +M  +GI+ D FTY+
Sbjct: 234 KMVGQGISPDIFTYT 248


>emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 50/124 (40%), Positives = 78/124 (62%), Gaps = 1/124 (0%)
 Frame = +3

Query: 12  YTILIDGLCKSGNLTAAKELFHSITEAGVAPNVVMYNVLIRGLCLGGLLAEANELHLEME 191
           YTI+IDG+C++G L AA+++F +++  G+ PNV  Y ++I GLC  GLL EAN+L +EM+
Sbjct: 455 YTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMD 514

Query: 192 KKGINGD-FTYSLQFDSSTVLQKNDIFKACLHLREMAKCDFSPENSTEPMLVELYSALND 368
             G + D  TY+    +  +LQ  +  +A   L+EM    FS + ST  +LVE+   L D
Sbjct: 515 GNGCSPDGCTYNT--ITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEM---LCD 569

Query: 369 ESID 380
           + +D
Sbjct: 570 DKLD 573



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
 Frame = +3

Query: 3   VITYTILIDGLCKSGNLTAAKELFHSITEAGVAPNVVMYNVLIRGLCLGGLLAEANELHL 182
           V+TY  LI+GLCK GN  AA  L  S+ +    P+VV+Y  +I  LC    + EA  L  
Sbjct: 172 VVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFS 231

Query: 183 EMEKKGINGD-FTYS 224
           +M  +GI+ D FTY+
Sbjct: 232 KMVGQGISPDIFTYT 246


>ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 50/124 (40%), Positives = 77/124 (62%), Gaps = 1/124 (0%)
 Frame = +3

Query: 12  YTILIDGLCKSGNLTAAKELFHSITEAGVAPNVVMYNVLIRGLCLGGLLAEANELHLEME 191
           Y I+IDG+C++G L AA++LF +++  G+ P+V  YN++I GLC  GLL EAN+L +EM+
Sbjct: 444 YNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMD 503

Query: 192 KKGINGD-FTYSLQFDSSTVLQKNDIFKACLHLREMAKCDFSPENSTEPMLVELYSALND 368
               + D  TY+    +   LQ N+  +A   L EM    FS + ST  +LVE+   L+D
Sbjct: 504 GNDCSPDGCTYNT--IARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEM---LSD 558

Query: 369 ESID 380
           + +D
Sbjct: 559 DGLD 562



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = +3

Query: 3   VITYTILIDGLCKSGNLTAAKELFHSITEAGVAPNVVMYNVLIRGLCLGGLLAEANELHL 182
           V+TY  LI+GLCK GN +AA  L  S+ +    P+VV+Y  +I  LC    + EA  L  
Sbjct: 161 VVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFS 220

Query: 183 EMEKKGINGD-FTYS 224
           +M  +GI+ D FTY+
Sbjct: 221 QMVGQGISPDIFTYT 235



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
 Frame = +3

Query: 3   VITYTILIDGLCKSGNLTAAKELFHSITEAGVAPNVVMYNVLIRGLCLGGLLAEANELHL 182
           V+ ++ ++D LCK G +T A E+   + + GV P+VV Y  L+ G CL   + EA ++  
Sbjct: 266 VVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFD 325

Query: 183 EMEKKGINGD-FTYSLQFDSSTVLQKNDIFKACLHLREMAKCDFSPENST 329
            M +KG   D  +Y+   +    + K D  KA     EM + ++ P+  T
Sbjct: 326 MMVRKGFAPDVISYTTLINGYCKIHKID--KAMYLFEEMCRKEWIPDTKT 373