BLASTX nr result

ID: Coptis24_contig00039970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039970
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78054.1| hypothetical protein VITISV_017198 [Vitis vinifera]    59   3e-07
emb|CAN78233.1| hypothetical protein VITISV_027466 [Vitis vinifera]    59   5e-07
emb|CAN79028.1| hypothetical protein VITISV_037224 [Vitis vinifera]    57   1e-06
gb|AAP54387.2| hAT family dimerisation domain containing protein...    57   1e-06
ref|NP_001064234.2| Os10g0170600 [Oryza sativa Japonica Group] g...    57   2e-06

>emb|CAN78054.1| hypothetical protein VITISV_017198 [Vitis vinifera]
          Length = 345

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 36/81 (44%), Positives = 45/81 (55%)
 Frame = +2

Query: 11  LAAGSTNGTSTLHKHITQTCKVFKKKQRLINQSHLKVEEKNGQGFVGF*NFYFNPEVTRD 190
           L A S NGT  LH HI    +  K++   I Q  L VE K G G V    F F+ E++R+
Sbjct: 24  LKADSKNGTKHLHVHIN---RCMKRRNVDIRQQLLAVERK-GNGKVQIGGFTFDQEISRE 79

Query: 191 AITEMIILH*YPFSMVQHVGF 253
            +   IILH YP S+V HVGF
Sbjct: 80  KLARAIILHEYPLSIVDHVGF 100


>emb|CAN78233.1| hypothetical protein VITISV_027466 [Vitis vinifera]
          Length = 805

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/81 (44%), Positives = 45/81 (55%)
 Frame = +2

Query: 11  LAAGSTNGTSTLHKHITQTCKVFKKKQRLINQSHLKVEEKNGQGFVGF*NFYFNPEVTRD 190
           L A S NGT  LH HI    +  K++   I Q  L VE K G G V    F F+ E++R+
Sbjct: 65  LKADSKNGTKHLHVHID---RCMKQRNVDIRQQLLAVERK-GHGKVQIGGFTFDQEISRE 120

Query: 191 AITEMIILH*YPFSMVQHVGF 253
            +   IILH YP S+V HVGF
Sbjct: 121 KLARAIILHEYPLSIVDHVGF 141


>emb|CAN79028.1| hypothetical protein VITISV_037224 [Vitis vinifera]
          Length = 448

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/81 (41%), Positives = 46/81 (56%)
 Frame = +2

Query: 11  LAAGSTNGTSTLHKHITQTCKVFKKKQRLINQSHLKVEEKNGQGFVGF*NFYFNPEVTRD 190
           L A S NGT  LH H+    +  K++   I Q  L VE K G G V   NF F+ +++R+
Sbjct: 65  LKADSKNGTKHLHIHLD---RCIKQRNVDIKQQLLAVERK-GYGKVQIGNFTFDQDISRE 120

Query: 191 AITEMIILH*YPFSMVQHVGF 253
            +  +IILH YP S+V H GF
Sbjct: 121 KLAHVIILHEYPLSIVDHAGF 141


>gb|AAP54387.2| hAT family dimerisation domain containing protein [Oryza sativa
           Japonica Group]
          Length = 756

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
 Frame = +2

Query: 11  LAAGSTNGTSTLHKHITQ-TCKVFKKKQRLINQSHLKVEEKNGQGFVGF*NFYFNPEVTR 187
           L   S+NGTS LH H+   T +  K   + + QS L+     G G V    + F+P V R
Sbjct: 149 LGGKSSNGTSHLHDHLKICTLRKIKMGPKTLAQSSLRFNSVEG-GKVSVDTYTFDPAVAR 207

Query: 188 DAITEMIILH*YPFSMVQHVGFNR 259
             +  MIILH YP S+V H+GF R
Sbjct: 208 RELAAMIILHEYPLSIVDHIGFRR 231


>ref|NP_001064234.2| Os10g0170600 [Oryza sativa Japonica Group]
           gi|21671885|gb|AAM74247.1|AC074355_9 Putative
           transposable element [Oryza sativa Japonica Group]
           gi|31430424|gb|AAP52341.1| hAT family dimerisation
           domain containing protein [Oryza sativa Japonica Group]
           gi|255679241|dbj|BAF26148.2| Os10g0170600 [Oryza sativa
           Japonica Group]
          Length = 772

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
 Frame = +2

Query: 11  LAAGSTNGTSTLHKHITQ-TCKVFKKKQRLINQSHLKVEEKNGQGFVGF*NFYFNPEVTR 187
           L   S+NGTS LH H+   T +  K   + + QS L+     G G V    + F+P V R
Sbjct: 165 LGGKSSNGTSHLHDHLKICTLRKIKMGPKTLAQSSLRFNSIEG-GKVSVDTYTFDPAVAR 223

Query: 188 DAITEMIILH*YPFSMVQHVGFNR 259
             +  MIILH YP S+V H+GF R
Sbjct: 224 RELAAMIILHEYPLSIVDHIGFRR 247


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