BLASTX nr result

ID: Coptis24_contig00039966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039966
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002464793.1| hypothetical protein SORBIDRAFT_01g026820 [S...    67   1e-09
ref|XP_004157048.1| PREDICTED: uncharacterized protein LOC101227...    64   2e-08
ref|XP_002527444.1| protein dimerization, putative [Ricinus comm...    63   2e-08
ref|XP_003543854.1| PREDICTED: uncharacterized protein LOC100780...    63   3e-08
ref|XP_002458511.1| hypothetical protein SORBIDRAFT_03g034920 [S...    62   4e-08

>ref|XP_002464793.1| hypothetical protein SORBIDRAFT_01g026820 [Sorghum bicolor]
           gi|241918647|gb|EER91791.1| hypothetical protein
           SORBIDRAFT_01g026820 [Sorghum bicolor]
          Length = 650

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
 Frame = -3

Query: 270 VKRIILDDDFWYKAKLVLSFIKPLWEMIRLCDSGKAVIGEVYQRMNGMLTNMKDALV--- 100
           VK  +LDD +W   K ++ F +P++ M+R+ D+ KA +  +Y+  + M+  +KD +    
Sbjct: 395 VKEKLLDDFWWDNVKYIVEFTEPIYSMLRVADTDKACLHLIYEMWDSMIEKVKDRIFCHE 454

Query: 99  -----DKMDTHDAIVSLISERWDKMIRPLHCLAYVLTP 1
                ++   +D I +++ +RW K   PLHCLA+ L P
Sbjct: 455 RKQPEEESAFYDTIYAILYDRWLKSNTPLHCLAHSLNP 492


>ref|XP_004157048.1| PREDICTED: uncharacterized protein LOC101227643 [Cucumis sativus]
          Length = 411

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/97 (30%), Positives = 56/97 (57%), Gaps = 7/97 (7%)
 Frame = -3

Query: 270 VKRIILDDDFWYKAKLVLSFIKPLWEMIRLCDSGKAVIGEVYQRMNGMLTNMKDALVD-- 97
           VK ++L++ +W K   +LSF  P+++M+R CD+ K  +  VY   + M+  +K ++    
Sbjct: 183 VKELVLEEIWWDKINYILSFTSPIYDMLRDCDTDKPYLHLVYNIWDTMIEKVKMSIYKHE 242

Query: 96  -----KMDTHDAIVSLISERWDKMIRPLHCLAYVLTP 1
                +  +   +V+++ +RW+K   PLHCLA+ L P
Sbjct: 243 GLRPIEFSSFYDVVNILIDRWNKNSTPLHCLAHSLNP 279


>ref|XP_002527444.1| protein dimerization, putative [Ricinus communis]
           gi|223533179|gb|EEF34936.1| protein dimerization,
           putative [Ricinus communis]
          Length = 633

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/92 (34%), Positives = 49/92 (53%)
 Frame = -3

Query: 276 EQVKRIILDDDFWYKAKLVLSFIKPLWEMIRLCDSGKAVIGEVYQRMNGMLTNMKDALVD 97
           E ++  IL DDFW K+ L+L   +P  +++ L D  K+VIG VY      L  ++   +D
Sbjct: 369 ESIESAILGDDFWSKSHLLLQLYEPFIKLLGLLDIDKSVIGAVYDWRVQALEALRSKAID 428

Query: 96  KMDTHDAIVSLISERWDKMIRPLHCLAYVLTP 1
             D  + +  LI  +WD +  PLH   Y+L P
Sbjct: 429 D-DILNQLEVLIENKWDVLFSPLHATGYILNP 459


>ref|XP_003543854.1| PREDICTED: uncharacterized protein LOC100780312 [Glycine max]
          Length = 557

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
 Frame = -3

Query: 270 VKRIILDDDFWYKAKLVLSFIKPLWEMIRLCDSGKAVIGEVYQRMNGMLTNMKDALV--- 100
           VK  +LDD +W K   +LSF  P+++++R  D+  + +  VY+  + M+  +K+A+    
Sbjct: 269 VKDTLLDDKWWDKVDYILSFTSPIYDVLRRTDTEASSLHLVYEMWDSMIEKVKNAIYQYE 328

Query: 99  -----DKMDTHDAIVSLISERWDKMIRPLHCLAYVLTP 1
                +    ++ + S++ +RW K   PLHCLA+ L P
Sbjct: 329 RKEESEGSTFYEVVHSILIDRWTKSSTPLHCLAHSLNP 366


>ref|XP_002458511.1| hypothetical protein SORBIDRAFT_03g034920 [Sorghum bicolor]
           gi|241930486|gb|EES03631.1| hypothetical protein
           SORBIDRAFT_03g034920 [Sorghum bicolor]
          Length = 687

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
 Frame = -3

Query: 270 VKRIILDDDFWYKAKLVLSFIKPLWEMIRLCDSGKAVIGEVYQRMNGMLTNMKDALV--- 100
           VK +IL+D +W K   +L    P++EMIRL D+    +  VY+  + M+  +K  +    
Sbjct: 383 VKDLILNDVWWDKVDYILKITTPIYEMIRLTDTDTPCLHLVYEMWDSMIEKVKKVIYRYE 442

Query: 99  -----DKMDTHDAIVSLISERWDKMIRPLHCLAYVLTP 1
                ++ D +  I  ++  RW K   PLHCLA+ L P
Sbjct: 443 GKQEDEQSDLYSVIYDILIARWTKGNNPLHCLAHSLNP 480


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