BLASTX nr result

ID: Coptis24_contig00039963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039963
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165911.1| PREDICTED: notchless protein homolog, partia...   105   3e-21
ref|XP_004149723.1| PREDICTED: notchless protein homolog [Cucumi...   105   3e-21
emb|CBI24943.3| unnamed protein product [Vitis vinifera]              101   7e-20
ref|XP_002313318.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
ref|XP_002276009.1| PREDICTED: notchless protein homolog [Vitis ...   101   7e-20

>ref|XP_004165911.1| PREDICTED: notchless protein homolog, partial [Cucumis sativus]
          Length = 403

 Score =  105 bits (263), Expect = 3e-21
 Identities = 53/69 (76%), Positives = 59/69 (85%)
 Frame = +3

Query: 6   LGAPMSVPKIAGPLQLQQIVNDLLKNEEKLP*AFYISDKELLVQLGTYLEKNKVSVEKVL 185
           LGAPM +P+ AGP QLQQ+VN LL NEEKLP AFYISD+EL V LG YLEKNKVSVEKVL
Sbjct: 28  LGAPMYLPQNAGPQQLQQMVNKLLSNEEKLPYAFYISDQELTVSLGAYLEKNKVSVEKVL 87

Query: 186 RIVYQPQAI 212
            +VYQPQA+
Sbjct: 88  TVVYQPQAV 96


>ref|XP_004149723.1| PREDICTED: notchless protein homolog [Cucumis sativus]
          Length = 478

 Score =  105 bits (263), Expect = 3e-21
 Identities = 53/69 (76%), Positives = 59/69 (85%)
 Frame = +3

Query: 6   LGAPMSVPKIAGPLQLQQIVNDLLKNEEKLP*AFYISDKELLVQLGTYLEKNKVSVEKVL 185
           LGAPM +P+ AGP QLQQ+VN LL NEEKLP AFYISD+EL V LG YLEKNKVSVEKVL
Sbjct: 28  LGAPMYLPQNAGPQQLQQMVNKLLSNEEKLPYAFYISDQELTVSLGAYLEKNKVSVEKVL 87

Query: 186 RIVYQPQAI 212
            +VYQPQA+
Sbjct: 88  TVVYQPQAV 96


>emb|CBI24943.3| unnamed protein product [Vitis vinifera]
          Length = 475

 Score =  101 bits (251), Expect = 7e-20
 Identities = 52/69 (75%), Positives = 59/69 (85%)
 Frame = +3

Query: 6   LGAPMSVPKIAGPLQLQQIVNDLLKNEEKLP*AFYISDKELLVQLGTYLEKNKVSVEKVL 185
           LG PM +P+ A P +LQQIVN LL NEEKLP AFYISD+EL+VQLGTYL+KNKVSVEKVL
Sbjct: 25  LGPPMYLPQNAAPKELQQIVNKLLNNEEKLPYAFYISDQELVVQLGTYLQKNKVSVEKVL 84

Query: 186 RIVYQPQAI 212
            IVYQ QA+
Sbjct: 85  PIVYQLQAV 93


>ref|XP_002313318.1| predicted protein [Populus trichocarpa] gi|222849726|gb|EEE87273.1|
           predicted protein [Populus trichocarpa]
          Length = 414

 Score =  101 bits (251), Expect = 7e-20
 Identities = 53/69 (76%), Positives = 59/69 (85%)
 Frame = +3

Query: 6   LGAPMSVPKIAGPLQLQQIVNDLLKNEEKLP*AFYISDKELLVQLGTYLEKNKVSVEKVL 185
           LGAP+ +P+ AGP QLQQIVN LL NEEKLP AFYISD+EL+V L TYL+KNKVSVEKVL
Sbjct: 21  LGAPLYLPQNAGPQQLQQIVNKLLNNEEKLPYAFYISDQELVVPLETYLQKNKVSVEKVL 80

Query: 186 RIVYQPQAI 212
            IV QPQAI
Sbjct: 81  AIVCQPQAI 89


>ref|XP_002276009.1| PREDICTED: notchless protein homolog [Vitis vinifera]
          Length = 477

 Score =  101 bits (251), Expect = 7e-20
 Identities = 52/69 (75%), Positives = 59/69 (85%)
 Frame = +3

Query: 6   LGAPMSVPKIAGPLQLQQIVNDLLKNEEKLP*AFYISDKELLVQLGTYLEKNKVSVEKVL 185
           LG PM +P+ A P +LQQIVN LL NEEKLP AFYISD+EL+VQLGTYL+KNKVSVEKVL
Sbjct: 27  LGPPMYLPQNAAPKELQQIVNKLLNNEEKLPYAFYISDQELVVQLGTYLQKNKVSVEKVL 86

Query: 186 RIVYQPQAI 212
            IVYQ QA+
Sbjct: 87  PIVYQLQAV 95


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