BLASTX nr result

ID: Coptis24_contig00039958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039958
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515588.1| conserved hypothetical protein [Ricinus comm...   126   2e-27
ref|XP_002324973.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
gb|AGG38115.1| maternal effect embryo arrest 55-2 protein [Dimoc...   123   2e-26
gb|AGG19193.1| maternal effect embryo arrest 55-1, partial [Dimo...   123   2e-26
ref|XP_002281302.1| PREDICTED: probable serine incorporator-like...   123   2e-26

>ref|XP_002515588.1| conserved hypothetical protein [Ricinus communis]
           gi|223545532|gb|EEF47037.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 398

 Score =  126 bits (316), Expect = 2e-27
 Identities = 54/82 (65%), Positives = 68/82 (82%)
 Frame = +3

Query: 51  WLDDCCRSDKYSERCYIQVTILSLAAYVACIAGVILMYICYAPRLSCILNIFFITLTLVI 230
           WL+DCC S+KY+ERC+I   +++  AYV CI G+I+MYI Y P  SC+LNIFFIT TLV+
Sbjct: 167 WLNDCCLSEKYAERCHIHAMLIATVAYVVCIVGIIMMYIWYTPETSCLLNIFFITWTLVL 226

Query: 231 LHLMTSVSLHPKINAGFLTPGL 296
           L ++TSVSLHPK+NAGFLTPGL
Sbjct: 227 LQVITSVSLHPKVNAGFLTPGL 248


>ref|XP_002324973.1| predicted protein [Populus trichocarpa] gi|222866407|gb|EEF03538.1|
           predicted protein [Populus trichocarpa]
          Length = 398

 Score =  124 bits (312), Expect = 6e-27
 Identities = 57/82 (69%), Positives = 68/82 (82%)
 Frame = +3

Query: 51  WLDDCCRSDKYSERCYIQVTILSLAAYVACIAGVILMYICYAPRLSCILNIFFITLTLVI 230
           WL+DCC+S+K + RC+I V +++  +YV CI GVILMYI Y P  SCILNIFFIT TLV+
Sbjct: 167 WLNDCCQSEKNAVRCHINVMLVATTSYVVCILGVILMYIWYTPEPSCILNIFFITWTLVL 226

Query: 231 LHLMTSVSLHPKINAGFLTPGL 296
           L LMTSVSLHPK+NAGFLTPGL
Sbjct: 227 LQLMTSVSLHPKVNAGFLTPGL 248


>gb|AGG38115.1| maternal effect embryo arrest 55-2 protein [Dimocarpus longan]
          Length = 311

 Score =  123 bits (308), Expect = 2e-26
 Identities = 55/82 (67%), Positives = 67/82 (81%)
 Frame = +3

Query: 51  WLDDCCRSDKYSERCYIQVTILSLAAYVACIAGVILMYICYAPRLSCILNIFFITLTLVI 230
           WL+DCC S+K + RC+I V +++  AYV CI G+I+MYI Y P  SC+LNIFFIT TLV+
Sbjct: 166 WLNDCCLSEKNAARCHIHVMLIATVAYVTCIVGIIMMYIWYTPDPSCLLNIFFITWTLVL 225

Query: 231 LHLMTSVSLHPKINAGFLTPGL 296
           L LMTSVSLHPK+NAGFLTPGL
Sbjct: 226 LQLMTSVSLHPKVNAGFLTPGL 247


>gb|AGG19193.1| maternal effect embryo arrest 55-1, partial [Dimocarpus longan]
           gi|456723001|gb|AGG38114.1| maternal effect embryo
           arrest 55-1 protein [Dimocarpus longan]
          Length = 398

 Score =  123 bits (308), Expect = 2e-26
 Identities = 55/82 (67%), Positives = 67/82 (81%)
 Frame = +3

Query: 51  WLDDCCRSDKYSERCYIQVTILSLAAYVACIAGVILMYICYAPRLSCILNIFFITLTLVI 230
           WL+DCC S+K + RC+I V +++  AYV CI G+I+MYI Y P  SC+LNIFFIT TLV+
Sbjct: 166 WLNDCCLSEKNAARCHIHVMLIATVAYVTCIVGIIMMYIWYTPDPSCLLNIFFITWTLVL 225

Query: 231 LHLMTSVSLHPKINAGFLTPGL 296
           L LMTSVSLHPK+NAGFLTPGL
Sbjct: 226 LQLMTSVSLHPKVNAGFLTPGL 247


>ref|XP_002281302.1| PREDICTED: probable serine incorporator-like [Vitis vinifera]
          Length = 397

 Score =  123 bits (308), Expect = 2e-26
 Identities = 56/82 (68%), Positives = 65/82 (79%)
 Frame = +3

Query: 51  WLDDCCRSDKYSERCYIQVTILSLAAYVACIAGVILMYICYAPRLSCILNIFFITLTLVI 230
           WL+DCC S KY++RC I V +L+  AYV CI G+ILMYI Y P  SC+LNIFFIT TLV+
Sbjct: 166 WLNDCCHSGKYADRCRIHVMLLATTAYVICIMGIILMYIWYVPEPSCLLNIFFITWTLVL 225

Query: 231 LHLMTSVSLHPKINAGFLTPGL 296
           L LMTSVSLHPK+N  FLTPGL
Sbjct: 226 LQLMTSVSLHPKVNESFLTPGL 247


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