BLASTX nr result

ID: Coptis24_contig00039954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039954
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262895.2| PREDICTED: uncharacterized protein L728-like...    74   3e-24
emb|CBI38184.3| unnamed protein product [Vitis vinifera]               74   3e-24
ref|XP_003516404.1| PREDICTED: uncharacterized protein L728-like...    73   1e-23
ref|XP_002304655.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-23
ref|XP_003614127.1| hypothetical protein MTR_5g045160 [Medicago ...    73   1e-22

>ref|XP_002262895.2| PREDICTED: uncharacterized protein L728-like isoform 1 [Vitis
           vinifera]
          Length = 647

 Score = 74.3 bits (181), Expect(2) = 3e-24
 Identities = 33/47 (70%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
 Frame = +2

Query: 134 IIKRLFVFSDMEFDQASANDWETDYKVVQRMFQENGF-ASVPEIVFW 271
           +IKR+ VFSDMEFDQASAN WETDY+ ++R F+E+G+ A+VPEIVFW
Sbjct: 541 MIKRIIVFSDMEFDQASANSWETDYEAIKRKFRESGYEAAVPEIVFW 587



 Score = 62.4 bits (150), Expect(2) = 3e-24
 Identities = 28/42 (66%), Positives = 34/42 (80%)
 Frame = +1

Query: 4   IERQDLRSKTSFVEPMEWGLNTDFQKVFDLILKVAIEGKLRE 129
           I  +DLRSK +FV  M WG+NTDFQKVFDLIL+VA+ GKL +
Sbjct: 497 ITGEDLRSKANFVREMNWGMNTDFQKVFDLILQVAVNGKLSQ 538


>emb|CBI38184.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score = 74.3 bits (181), Expect(2) = 3e-24
 Identities = 33/47 (70%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
 Frame = +2

Query: 134 IIKRLFVFSDMEFDQASANDWETDYKVVQRMFQENGF-ASVPEIVFW 271
           +IKR+ VFSDMEFDQASAN WETDY+ ++R F+E+G+ A+VPEIVFW
Sbjct: 532 MIKRIIVFSDMEFDQASANSWETDYEAIKRKFRESGYEAAVPEIVFW 578



 Score = 62.4 bits (150), Expect(2) = 3e-24
 Identities = 28/42 (66%), Positives = 34/42 (80%)
 Frame = +1

Query: 4   IERQDLRSKTSFVEPMEWGLNTDFQKVFDLILKVAIEGKLRE 129
           I  +DLRSK +FV  M WG+NTDFQKVFDLIL+VA+ GKL +
Sbjct: 488 ITGEDLRSKANFVREMNWGMNTDFQKVFDLILQVAVNGKLSQ 529


>ref|XP_003516404.1| PREDICTED: uncharacterized protein L728-like [Glycine max]
          Length = 646

 Score = 73.2 bits (178), Expect(2) = 1e-23
 Identities = 34/47 (72%), Positives = 39/47 (82%), Gaps = 1/47 (2%)
 Frame = +2

Query: 134 IIKRLFVFSDMEFDQASANDWETDYKVVQRMFQENGFA-SVPEIVFW 271
           +IKRLFVFSDMEFDQASAN WETDY+ + R F E GF  +VP+IVFW
Sbjct: 540 MIKRLFVFSDMEFDQASANPWETDYQAITRKFGEKGFGDAVPQIVFW 586



 Score = 61.6 bits (148), Expect(2) = 1e-23
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = +1

Query: 4   IERQDLRSKTSFVEPMEWGLNTDFQKVFDLILKVAIEGKLR 126
           IE  DL SKT F+  MEWG+NTDFQKVFDL+L+VA+ G L+
Sbjct: 496 IEGDDLGSKTEFIRNMEWGMNTDFQKVFDLLLEVAVSGNLK 536


>ref|XP_002304655.1| predicted protein [Populus trichocarpa] gi|222842087|gb|EEE79634.1|
           predicted protein [Populus trichocarpa]
          Length = 651

 Score = 72.4 bits (176), Expect(2) = 5e-23
 Identities = 33/47 (70%), Positives = 39/47 (82%), Gaps = 1/47 (2%)
 Frame = +2

Query: 134 IIKRLFVFSDMEFDQASANDWETDYKVVQRMFQENGFASV-PEIVFW 271
           +IKR+FVFSDMEFDQAS N WETDY+V+ R F E G+ +V PEIVFW
Sbjct: 545 MIKRVFVFSDMEFDQASCNPWETDYQVIARKFTEKGYGNVIPEIVFW 591



 Score = 60.1 bits (144), Expect(2) = 5e-23
 Identities = 27/42 (64%), Positives = 32/42 (76%)
 Frame = +1

Query: 4   IERQDLRSKTSFVEPMEWGLNTDFQKVFDLILKVAIEGKLRE 129
           +E   L  KT FV  MEWG+NT+FQKVFDLIL+VA+ G LRE
Sbjct: 501 VEGDSLLQKTEFVRSMEWGMNTNFQKVFDLILQVAVNGNLRE 542


>ref|XP_003614127.1| hypothetical protein MTR_5g045160 [Medicago truncatula]
           gi|355515462|gb|AES97085.1| hypothetical protein
           MTR_5g045160 [Medicago truncatula]
          Length = 729

 Score = 72.8 bits (177), Expect(2) = 1e-22
 Identities = 32/47 (68%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
 Frame = +2

Query: 134 IIKRLFVFSDMEFDQASANDWETDYKVVQRMFQENGFAS-VPEIVFW 271
           +IKR+FVFSDMEFDQASAN WETDY+ + R ++E G+ S VP+IVFW
Sbjct: 558 MIKRIFVFSDMEFDQASANSWETDYQAITRKYREKGYGSAVPQIVFW 604



 Score = 58.5 bits (140), Expect(2) = 1e-22
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = +1

Query: 4   IERQDLRSKTSFVEPMEWGLNTDFQKVFDLILKVAIEGKLRE 129
           I+  +L+SKT FV  M+WG+NTDFQKVFD IL VA+ G L+E
Sbjct: 514 IKGDNLKSKTQFVRNMDWGMNTDFQKVFDRILDVAVNGNLKE 555


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