BLASTX nr result

ID: Coptis24_contig00039945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039945
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002865013.1| ATEB1C [Arabidopsis lyrata subsp. lyrata] gi...    99   5e-19
ref|XP_002524922.1| microtubule binding protein, putative [Ricin...    99   5e-19
ref|NP_201528.1| end binding protein 1C [Arabidopsis thaliana] g...    99   5e-19
emb|CBI33771.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|XP_002283607.1| PREDICTED: microtubule-associated protein RP...    97   1e-18

>ref|XP_002865013.1| ATEB1C [Arabidopsis lyrata subsp. lyrata]
           gi|297310848|gb|EFH41272.1| ATEB1C [Arabidopsis lyrata
           subsp. lyrata]
          Length = 325

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/49 (95%), Positives = 48/49 (97%)
 Frame = +1

Query: 166 MATNIGMMDAAYFVGRSEILAWINSTLQLNLSKVEEGCSGAVHCQLMDS 312
           MATNIGMMD+AYFVGRSEILAWINSTLQLNLSKVEE CSGAVHCQLMDS
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLQLNLSKVEEACSGAVHCQLMDS 49


>ref|XP_002524922.1| microtubule binding protein, putative [Ricinus communis]
           gi|223535757|gb|EEF37419.1| microtubule binding protein,
           putative [Ricinus communis]
          Length = 264

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/49 (95%), Positives = 48/49 (97%)
 Frame = +1

Query: 166 MATNIGMMDAAYFVGRSEILAWINSTLQLNLSKVEEGCSGAVHCQLMDS 312
           MATNIGMMDAAYFVGRSEILAWINSTLQLNLSKVEE CSGAVHCQLMD+
Sbjct: 1   MATNIGMMDAAYFVGRSEILAWINSTLQLNLSKVEEACSGAVHCQLMDA 49


>ref|NP_201528.1| end binding protein 1C [Arabidopsis thaliana]
           gi|75262450|sp|Q9FGQ6.1|EB1C_ARATH RecName:
           Full=Microtubule-associated protein RP/EB family member
           1C; AltName: Full=APC-binding protein EB1C; AltName:
           Full=End-binding protein 1C; Short=AtEB1C; AltName:
           Full=Protein ATEB1 homolog 1; Short=AtEB1H1
           gi|9759276|dbj|BAB09646.1| unnamed protein product
           [Arabidopsis thaliana] gi|21593362|gb|AAM65311.1|
           microtubule-associated protein EB1-like protein
           [Arabidopsis thaliana] gi|51969132|dbj|BAD43258.1|
           unknown protein [Arabidopsis thaliana]
           gi|114050655|gb|ABI49477.1| At5g67270 [Arabidopsis
           thaliana] gi|332010940|gb|AED98323.1| end binding
           protein 1C [Arabidopsis thaliana]
          Length = 329

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/49 (95%), Positives = 48/49 (97%)
 Frame = +1

Query: 166 MATNIGMMDAAYFVGRSEILAWINSTLQLNLSKVEEGCSGAVHCQLMDS 312
           MATNIGMMD+AYFVGRSEILAWINSTLQLNLSKVEE CSGAVHCQLMDS
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLQLNLSKVEEACSGAVHCQLMDS 49


>emb|CBI33771.3| unnamed protein product [Vitis vinifera]
          Length = 305

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 46/49 (93%), Positives = 48/49 (97%)
 Frame = +1

Query: 166 MATNIGMMDAAYFVGRSEILAWINSTLQLNLSKVEEGCSGAVHCQLMDS 312
           MATNIGMMD+AYFVGRSEIL+WINSTLQLNLSKVEE CSGAVHCQLMDS
Sbjct: 1   MATNIGMMDSAYFVGRSEILSWINSTLQLNLSKVEEACSGAVHCQLMDS 49


>ref|XP_002283607.1| PREDICTED: microtubule-associated protein RP/EB family member
           1-like [Vitis vinifera]
          Length = 326

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 46/49 (93%), Positives = 48/49 (97%)
 Frame = +1

Query: 166 MATNIGMMDAAYFVGRSEILAWINSTLQLNLSKVEEGCSGAVHCQLMDS 312
           MATNIGMMD+AYFVGRSEIL+WINSTLQLNLSKVEE CSGAVHCQLMDS
Sbjct: 1   MATNIGMMDSAYFVGRSEILSWINSTLQLNLSKVEEACSGAVHCQLMDS 49


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