BLASTX nr result

ID: Coptis24_contig00039939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039939
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516256.1| beta-galactosidase, putative [Ricinus commun...   145   3e-33
ref|XP_004144130.1| PREDICTED: beta-galactosidase 15-like [Cucum...   140   8e-32
ref|XP_004171681.1| PREDICTED: LOW QUALITY PROTEIN: beta-galacto...   138   5e-31
ref|XP_002516237.1| beta-galactosidase, putative [Ricinus commun...   133   2e-29
ref|XP_002276918.2| PREDICTED: beta-galactosidase 7-like [Vitis ...   131   7e-29

>ref|XP_002516256.1| beta-galactosidase, putative [Ricinus communis]
           gi|223544742|gb|EEF46258.1| beta-galactosidase, putative
           [Ricinus communis]
          Length = 848

 Score =  145 bits (366), Expect = 3e-33
 Identities = 68/119 (57%), Positives = 90/119 (75%), Gaps = 1/119 (0%)
 Frame = +1

Query: 1   GTYNFVFEKNVSINPGINQISLLSATVGLKNYGAMFDTIATGV-SDVQLIARKGDVEIIK 177
           G +++VFEK++ + PG N ISLLSATVGL+NYG MFD + TG+   V++I  +GD +++K
Sbjct: 543 GVFSYVFEKSLKLRPGKNVISLLSATVGLQNYGPMFDLVQTGIPGPVEIIGHRGDEKVVK 602

Query: 178 NLSSSKWVNKVGLHGEEKQLYSVESRHASRWVEDNLPMDNMMVWYKGTFEAPLGTDSVV 354
           +LSS KW   VGL+G   +LYS  SRHASRWVE +LP + MM+WYK TF+APLG D VV
Sbjct: 603 DLSSHKWSYSVGLNGFHNELYSSNSRHASRWVEQDLPTNKMMIWYKTTFKAPLGKDPVV 661


>ref|XP_004144130.1| PREDICTED: beta-galactosidase 15-like [Cucumis sativus]
          Length = 827

 Score =  140 bits (354), Expect = 8e-32
 Identities = 69/116 (59%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
 Frame = +1

Query: 7   YNFVFEKNVSINPGINQISLLSATVGLKNYGAMFDTIATG-VSDVQLIARKGDVEIIKNL 183
           YN++FE+ V + PG N ISLLSAT+GLKNYGA +D I +G V  VQLI R GD  IIK+L
Sbjct: 525 YNYIFEQEVKLKPGKNIISLLSATIGLKNYGAQYDLIQSGIVGPVQLIGRHGDETIIKDL 584

Query: 184 SSSKWVNKVGLHGEEKQLYSVESRHASRWVEDNLPMDNMMVWYKGTFEAPLGTDSV 351
           S+ KW  +VGLHG E +L+S ESR A++W   NLP++ MM WYK TF+ PLGTD V
Sbjct: 585 SNHKWSYEVGLHGFENRLFSPESRFATKWQSGNLPVNRMMTWYKTTFKPPLGTDPV 640


>ref|XP_004171681.1| PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase 15-like [Cucumis
           sativus]
          Length = 827

 Score =  138 bits (347), Expect = 5e-31
 Identities = 68/116 (58%), Positives = 85/116 (73%), Gaps = 1/116 (0%)
 Frame = +1

Query: 7   YNFVFEKNVSINPGINQISLLSATVGLKNYGAMFDTIATG-VSDVQLIARKGDVEIIKNL 183
           YN++ E+ V + PG N ISLLSAT+GLKNYGA +D I +G V  VQLI R GD  IIK+L
Sbjct: 525 YNYIXEQEVKLKPGKNIISLLSATIGLKNYGAQYDLIQSGIVGPVQLIGRHGDETIIKDL 584

Query: 184 SSSKWVNKVGLHGEEKQLYSVESRHASRWVEDNLPMDNMMVWYKGTFEAPLGTDSV 351
           S+ KW  +VGLHG E +L+S ESR A++W   NLP++ MM WYK TF+ PLGTD V
Sbjct: 585 SNHKWSYEVGLHGFENRLFSPESRFATKWQSGNLPVNRMMTWYKTTFKPPLGTDPV 640


>ref|XP_002516237.1| beta-galactosidase, putative [Ricinus communis]
           gi|223544723|gb|EEF46239.1| beta-galactosidase, putative
           [Ricinus communis]
          Length = 825

 Score =  133 bits (334), Expect = 2e-29
 Identities = 66/116 (56%), Positives = 85/116 (73%), Gaps = 1/116 (0%)
 Frame = +1

Query: 10  NFVFEKNVSINPGINQISLLSATVGLKNYGAMFDTIATGV-SDVQLIARKGDVEIIKNLS 186
           N+VFEK+V +  G N I+LLSATVGL NYGA +D I  G+   V+L+ RKGD  IIK+LS
Sbjct: 524 NYVFEKSVKLKHGRNLITLLSATVGLANYGANYDLIQAGILGPVELVGRKGDETIIKDLS 583

Query: 187 SSKWVNKVGLHGEEKQLYSVESRHASRWVEDNLPMDNMMVWYKGTFEAPLGTDSVV 354
           +++W  KVGL G E +LY  +S+HAS+W E  LP + M+ WYK TF+APLGTD VV
Sbjct: 584 NNRWSYKVGLLGLEDKLYLSDSKHASKWQEQELPTNKMLTWYKTTFKAPLGTDPVV 639


>ref|XP_002276918.2| PREDICTED: beta-galactosidase 7-like [Vitis vinifera]
           gi|297738528|emb|CBI27773.3| unnamed protein product
           [Vitis vinifera]
          Length = 835

 Score =  131 bits (329), Expect = 7e-29
 Identities = 62/119 (52%), Positives = 87/119 (73%), Gaps = 1/119 (0%)
 Frame = +1

Query: 1   GTYNFVFEKNVSINPGINQISLLSATVGLKNYGAMFDTIATGVS-DVQLIARKGDVEIIK 177
           G +N+VFE+ V + PG N I+LLSAT+G +NYGA +D + +G+S  V+++ RKGD  IIK
Sbjct: 535 GIFNYVFEEKVKLKPGKNLIALLSATIGFQNYGAFYDLVQSGISGPVEIVGRKGDETIIK 594

Query: 178 NLSSSKWVNKVGLHGEEKQLYSVESRHASRWVEDNLPMDNMMVWYKGTFEAPLGTDSVV 354
           +LSS KW  KVG+HG   +LY  ES +  +W E N+P++  + WYK TF+APLGTD+VV
Sbjct: 595 DLSSHKWSYKVGMHGMAMKLYDPESPY--KWEEGNVPLNRNLTWYKTTFKAPLGTDAVV 651


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