BLASTX nr result

ID: Coptis24_contig00039936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039936
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26253.3| unnamed protein product [Vitis vinifera]               69   4e-10
ref|XP_002278494.1| PREDICTED: uncharacterized protein LOC100259...    69   4e-10
emb|CAN69767.1| hypothetical protein VITISV_022062 [Vitis vinifera]    64   2e-08
gb|AFK36603.1| unknown [Lotus japonicus]                               57   1e-06
ref|XP_004139818.1| PREDICTED: uncharacterized protein LOC101210...    57   2e-06

>emb|CBI26253.3| unnamed protein product [Vitis vinifera]
          Length = 507

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/56 (64%), Positives = 44/56 (78%)
 Frame = -3

Query: 267 GEMKKNNPNLVKVD*KTRQKQRIFYGYLATASIDLEKVNFETRKTNSIKIKMDLKP 100
           G   +NNPNLVKVD +T +K+RIFYGYLATAS DL+KV+FETRK   I+ K + KP
Sbjct: 451 GRDSENNPNLVKVDERTGEKKRIFYGYLATAS-DLDKVDFETRKKVLIESKREYKP 505


>ref|XP_002278494.1| PREDICTED: uncharacterized protein LOC100259596 [Vitis vinifera]
          Length = 582

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/56 (64%), Positives = 44/56 (78%)
 Frame = -3

Query: 267 GEMKKNNPNLVKVD*KTRQKQRIFYGYLATASIDLEKVNFETRKTNSIKIKMDLKP 100
           G   +NNPNLVKVD +T +K+RIFYGYLATAS DL+KV+FETRK   I+ K + KP
Sbjct: 526 GRDSENNPNLVKVDERTGEKKRIFYGYLATAS-DLDKVDFETRKKVLIESKREYKP 580


>emb|CAN69767.1| hypothetical protein VITISV_022062 [Vitis vinifera]
          Length = 146

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/44 (72%), Positives = 38/44 (86%)
 Frame = -3

Query: 267 GEMKKNNPNLVKVD*KTRQKQRIFYGYLATASIDLEKVNFETRK 136
           G   +NNPNLVKVD +T +K+RIFYGYLATAS DL+KV+FETRK
Sbjct: 76  GRDSENNPNLVKVDERTGEKKRIFYGYLATAS-DLDKVDFETRK 118


>gb|AFK36603.1| unknown [Lotus japonicus]
          Length = 132

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/56 (55%), Positives = 39/56 (69%)
 Frame = -3

Query: 267 GEMKKNNPNLVKVD*KTRQKQRIFYGYLATASIDLEKVNFETRKTNSIKIKMDLKP 100
           G+  +NNPNLVKVD K   K+RI YGYL TA  DL+KV+F+TRK   I+   + KP
Sbjct: 76  GKDDENNPNLVKVDEKKGDKRRILYGYLGTA-FDLDKVDFDTRKKLVIESWREYKP 130


>ref|XP_004139818.1| PREDICTED: uncharacterized protein LOC101210911 [Cucumis sativus]
           gi|449492576|ref|XP_004159037.1| PREDICTED:
           uncharacterized LOC101210911 [Cucumis sativus]
          Length = 564

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/49 (59%), Positives = 39/49 (79%)
 Frame = -3

Query: 249 NPNLVKVD*KTRQKQRIFYGYLATASIDLEKVNFETRKTNSIKIKMDLK 103
           NPNLV VD K+ +K+RIFYGYLATA+ D++KV+F+TRK  +I+   D K
Sbjct: 514 NPNLVMVDEKSGEKKRIFYGYLATAA-DMDKVDFDTRKKVTIESCRDFK 561


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