BLASTX nr result
ID: Coptis24_contig00039927
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00039927 (245 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264351.2| PREDICTED: uncharacterized protein LOC100241... 69 5e-10 emb|CBI18109.3| unnamed protein product [Vitis vinifera] 69 5e-10 emb|CAN83105.1| hypothetical protein VITISV_007645 [Vitis vinifera] 69 5e-10 ref|XP_002526678.1| breast cancer type 2 susceptibility protein ... 65 6e-09 ref|XP_004156673.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 59 3e-07 >ref|XP_002264351.2| PREDICTED: uncharacterized protein LOC100241398 [Vitis vinifera] Length = 1126 Score = 68.6 bits (166), Expect = 5e-10 Identities = 37/70 (52%), Positives = 46/70 (65%) Frame = +1 Query: 31 LPGHMSSDMCKSSGKTPTVKFQTAGGRSISVSNDALQRAMSLLGDPEFGDLPINEGADGP 210 +P S+M + P +KF TAGGRSISVS+DALQRA SLLGDPE G +NEG + Sbjct: 211 VPHLKQSEMYNPAPNPPPIKFHTAGGRSISVSSDALQRARSLLGDPELG-TSLNEGDEDD 269 Query: 211 LFSSLKENSF 240 + SS + SF Sbjct: 270 MISSFLKGSF 279 >emb|CBI18109.3| unnamed protein product [Vitis vinifera] Length = 1134 Score = 68.6 bits (166), Expect = 5e-10 Identities = 37/70 (52%), Positives = 46/70 (65%) Frame = +1 Query: 31 LPGHMSSDMCKSSGKTPTVKFQTAGGRSISVSNDALQRAMSLLGDPEFGDLPINEGADGP 210 +P S+M + P +KF TAGGRSISVS+DALQRA SLLGDPE G +NEG + Sbjct: 234 VPHLKQSEMYNPAPNPPPIKFHTAGGRSISVSSDALQRARSLLGDPELG-TSLNEGDEDD 292 Query: 211 LFSSLKENSF 240 + SS + SF Sbjct: 293 MISSFLKGSF 302 >emb|CAN83105.1| hypothetical protein VITISV_007645 [Vitis vinifera] Length = 288 Score = 68.6 bits (166), Expect = 5e-10 Identities = 37/70 (52%), Positives = 46/70 (65%) Frame = +1 Query: 31 LPGHMSSDMCKSSGKTPTVKFQTAGGRSISVSNDALQRAMSLLGDPEFGDLPINEGADGP 210 +P S+M + P +KF TAGGRSISVS+DALQRA SLLGDPE G +NEG + Sbjct: 211 VPHLKQSEMYNPAPNPPPIKFHTAGGRSISVSSDALQRARSLLGDPELG-TSLNEGDEDD 269 Query: 211 LFSSLKENSF 240 + SS + SF Sbjct: 270 MISSFLKGSF 279 >ref|XP_002526678.1| breast cancer type 2 susceptibility protein brca2, putative [Ricinus communis] gi|223533978|gb|EEF35700.1| breast cancer type 2 susceptibility protein brca2, putative [Ricinus communis] Length = 1156 Score = 65.1 bits (157), Expect = 6e-09 Identities = 33/67 (49%), Positives = 43/67 (64%) Frame = +1 Query: 34 PGHMSSDMCKSSGKTPTVKFQTAGGRSISVSNDALQRAMSLLGDPEFGDLPINEGADGPL 213 P + S++ S K P++KF TAGGRS+SVS+DAL+RA SLLGDP+ G+ E P Sbjct: 213 PNLLQSEVHNSITKPPSIKFHTAGGRSLSVSSDALKRAKSLLGDPDLGNFLNEEDVVDPA 272 Query: 214 FSSLKEN 234 S EN Sbjct: 273 LSVFNEN 279 >ref|XP_004156673.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101230245 [Cucumis sativus] Length = 1111 Score = 59.3 bits (142), Expect = 3e-07 Identities = 28/48 (58%), Positives = 34/48 (70%) Frame = +1 Query: 34 PGHMSSDMCKSSGKTPTVKFQTAGGRSISVSNDALQRAMSLLGDPEFG 177 P ++ + K P +KF TAGGRS+SVS+DALQRA SLLGDPE G Sbjct: 205 PSFRQIELPNKAPKAPPIKFHTAGGRSLSVSSDALQRARSLLGDPELG 252