BLASTX nr result

ID: Coptis24_contig00039923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039923
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38728.3| unnamed protein product [Vitis vinifera]              104   7e-21
ref|XP_002268180.1| PREDICTED: probably inactive receptor-like p...   104   7e-21
emb|CAN81350.1| hypothetical protein VITISV_012720 [Vitis vinifera]   104   7e-21
ref|XP_002515095.1| ATP binding protein, putative [Ricinus commu...   101   6e-20
ref|XP_002301450.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19

>emb|CBI38728.3| unnamed protein product [Vitis vinifera]
          Length = 835

 Score =  104 bits (260), Expect = 7e-21
 Identities = 53/96 (55%), Positives = 65/96 (67%)
 Frame = -1

Query: 294 RLSCVNDTTLFLNISSLSYRISEFFADGVLVDFPREGTTSFGHYLDFNFFGFEDNAYYGI 115
           RLSCVN TTLFLNI+S SYR+ +FF+DG+LVDFP  G TS   Y D N F F  N ++GI
Sbjct: 146 RLSCVNSTTLFLNIASNSYRVLQFFSDGILVDFP--GATSCRQYNDLNSFRFSGNDHFGI 203

Query: 114 SVQNVLGLYDCEDSSVCKDVDYCDQIKPPLPTCPGN 7
           S+ N +GLYDCEDSS+C+     D     +P C  N
Sbjct: 204 SIDNFIGLYDCEDSSLCR----ADCEINVMPACDSN 235


>ref|XP_002268180.1| PREDICTED: probably inactive receptor-like protein kinase
           At2g46850-like [Vitis vinifera]
          Length = 665

 Score =  104 bits (260), Expect = 7e-21
 Identities = 53/96 (55%), Positives = 65/96 (67%)
 Frame = -1

Query: 294 RLSCVNDTTLFLNISSLSYRISEFFADGVLVDFPREGTTSFGHYLDFNFFGFEDNAYYGI 115
           RLSCVN TTLFLNI+S SYR+ +FF+DG+LVDFP  G TS   Y D N F F  N ++GI
Sbjct: 86  RLSCVNSTTLFLNIASNSYRVLQFFSDGILVDFP--GATSCRQYNDLNSFRFSGNDHFGI 143

Query: 114 SVQNVLGLYDCEDSSVCKDVDYCDQIKPPLPTCPGN 7
           S+ N +GLYDCEDSS+C+     D     +P C  N
Sbjct: 144 SIDNFIGLYDCEDSSLCR----ADCEINVMPACDSN 175


>emb|CAN81350.1| hypothetical protein VITISV_012720 [Vitis vinifera]
          Length = 628

 Score =  104 bits (260), Expect = 7e-21
 Identities = 53/96 (55%), Positives = 65/96 (67%)
 Frame = -1

Query: 294 RLSCVNDTTLFLNISSLSYRISEFFADGVLVDFPREGTTSFGHYLDFNFFGFEDNAYYGI 115
           RLSCVN TTLFLNI+S SYR+ +FF+DG+LVDFP  G TS   Y D N F F  N ++GI
Sbjct: 49  RLSCVNSTTLFLNIASNSYRVLQFFSDGILVDFP--GATSCRQYNDLNSFRFSGNDHFGI 106

Query: 114 SVQNVLGLYDCEDSSVCKDVDYCDQIKPPLPTCPGN 7
           S+ N +GLYDCEDSS+C+     D     +P C  N
Sbjct: 107 SIDNFIGLYDCEDSSLCR----ADCEINVMPACDSN 138


>ref|XP_002515095.1| ATP binding protein, putative [Ricinus communis]
           gi|223545575|gb|EEF47079.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 639

 Score =  101 bits (252), Expect = 6e-20
 Identities = 52/98 (53%), Positives = 64/98 (65%), Gaps = 6/98 (6%)
 Frame = -1

Query: 291 LSCVNDTTLFLNISSLSYRISEFFADGVLVDFPREGTTSFGHYLDFNFFGFEDNAYYGIS 112
           LSC    TL LNI S SYR+ EFFADG+LVDFP  G+++   Y D N FGF  N ++GIS
Sbjct: 67  LSCSISNTLSLNIDSQSYRVIEFFADGILVDFP--GSSACRRYNDLNSFGFSGNGFFGIS 124

Query: 111 VQNVLGLYDCEDSSVCK------DVDYCDQIKPPLPTC 16
           + NV+GLYDCEDSS+CK      D+  CD      P+C
Sbjct: 125 MDNVIGLYDCEDSSLCKAECETIDLSGCDGNSNASPSC 162


>ref|XP_002301450.1| predicted protein [Populus trichocarpa] gi|222843176|gb|EEE80723.1|
           predicted protein [Populus trichocarpa]
          Length = 641

 Score =  100 bits (249), Expect = 1e-19
 Identities = 52/97 (53%), Positives = 67/97 (69%)
 Frame = -1

Query: 291 LSCVNDTTLFLNISSLSYRISEFFADGVLVDFPREGTTSFGHYLDFNFFGFEDNAYYGIS 112
           LSC N TTL+LNI SLSY++ EFF+DG+LVDF   G+++   Y D N FG   N  +G+S
Sbjct: 66  LSCSNSTTLYLNIDSLSYKVLEFFSDGILVDF--SGSSTCRQYNDLNSFGLAGNDCFGLS 123

Query: 111 VQNVLGLYDCEDSSVCKDVDYCDQIKPPLPTCPGNST 1
           V NV+GLYDCEDSS+CK    C+ I   LP C G+ +
Sbjct: 124 VDNVIGLYDCEDSSLCK--ADCETI--DLPGCDGSGS 156


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