BLASTX nr result

ID: Coptis24_contig00039909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039909
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326495.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37
ref|XP_002520123.1| Serine/threonine-protein kinase PBS1, putati...   156   1e-36
ref|XP_004135190.1| PREDICTED: probable LRR receptor-like serine...   135   3e-30
ref|XP_002271161.2| PREDICTED: LOW QUALITY PROTEIN: probable LRR...   134   6e-30
emb|CBI32004.3| unnamed protein product [Vitis vinifera]              134   6e-30

>ref|XP_002326495.1| predicted protein [Populus trichocarpa] gi|222833817|gb|EEE72294.1|
           predicted protein [Populus trichocarpa]
          Length = 745

 Score =  159 bits (402), Expect = 2e-37
 Identities = 75/107 (70%), Positives = 92/107 (85%), Gaps = 1/107 (0%)
 Frame = -2

Query: 318 FNQLQHLDISSNQLVGPIPSTLFSLPSIHYINLAGNRLSGALPTNLSCSNELEHVDLSNN 139
           FNQLQ LDISSN+L+GPIP  LFSLPS+ Y++LA N+LSGALPTN+SCS +L+ VD+S+N
Sbjct: 232 FNQLQQLDISSNKLIGPIPPALFSLPSLQYLDLAQNQLSGALPTNISCSVKLQFVDISHN 291

Query: 138 LLIGKLPLCIVSNSSSRVLFYSWNCLSAG-NSKYQHPYSFCHKEALA 1
           +LIGKLP CI SN+S+R +  SWNCLS G N+ YQHPYSFC+KEALA
Sbjct: 292 ILIGKLPSCIASNTSTRTVISSWNCLSGGKNASYQHPYSFCNKEALA 338


>ref|XP_002520123.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
           gi|223540615|gb|EEF42178.1| Serine/threonine-protein
           kinase PBS1, putative [Ricinus communis]
          Length = 749

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/107 (70%), Positives = 92/107 (85%), Gaps = 1/107 (0%)
 Frame = -2

Query: 318 FNQLQHLDISSNQLVGPIPSTLFSLPSIHYINLAGNRLSGALPTNLSCSNELEHVDLSNN 139
           FNQLQ LDISSN+L+GP+PS+LFSLPSI +++LA N+LSGALP+N+SC+ +L+ VD+S N
Sbjct: 239 FNQLQQLDISSNKLIGPVPSSLFSLPSIQFLDLAQNQLSGALPSNISCNFKLKFVDISKN 298

Query: 138 LLIGKLPLCIVSNSSSRVLFYSWNCLSAG-NSKYQHPYSFCHKEALA 1
           LLIGKLP CI SNSS+R +  SWNCLS+G NS  QHP SFCHKEALA
Sbjct: 299 LLIGKLPSCIASNSSNRTVISSWNCLSSGANSSSQHPLSFCHKEALA 345


>ref|XP_004135190.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g14390-like [Cucumis sativus]
           gi|449478441|ref|XP_004155319.1| PREDICTED: probable LRR
           receptor-like serine/threonine-protein kinase
           At1g14390-like [Cucumis sativus]
          Length = 728

 Score =  135 bits (341), Expect = 3e-30
 Identities = 63/105 (60%), Positives = 84/105 (80%)
 Frame = -2

Query: 315 NQLQHLDISSNQLVGPIPSTLFSLPSIHYINLAGNRLSGALPTNLSCSNELEHVDLSNNL 136
           N+LQ  DIS N+ +GP+ ++LFSLP++ Y+NLA N+LSGAL  N +C+  L+ VD+S+NL
Sbjct: 239 NKLQLFDISYNKFLGPVHASLFSLPAVQYLNLAYNQLSGALSINTTCNRNLKFVDISHNL 298

Query: 135 LIGKLPLCIVSNSSSRVLFYSWNCLSAGNSKYQHPYSFCHKEALA 1
           LIGKLP CI  NSS+R +  SWNCLS+G+SK QH YS+CHKEA+A
Sbjct: 299 LIGKLPSCIRPNSSNRTVNISWNCLSSGSSKDQHTYSYCHKEAMA 343


>ref|XP_002271161.2| PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like
           serine/threonine-protein kinase At1g14390 [Vitis
           vinifera]
          Length = 746

 Score =  134 bits (338), Expect = 6e-30
 Identities = 65/106 (61%), Positives = 79/106 (74%)
 Frame = -2

Query: 318 FNQLQHLDISSNQLVGPIPSTLFSLPSIHYINLAGNRLSGALPTNLSCSNELEHVDLSNN 139
           F++LQ  DISSN+ VGPIPS++F LPSI Y+NLA N+ +GA  TN+SCS  L  VD+S+N
Sbjct: 229 FDRLQQFDISSNKFVGPIPSSIFYLPSIQYLNLAKNQFTGAFQTNISCSGNLRFVDISHN 288

Query: 138 LLIGKLPLCIVSNSSSRVLFYSWNCLSAGNSKYQHPYSFCHKEALA 1
            LIGKLP C+ SNSS+  +  SWNCLS GN  YQ P S C KEALA
Sbjct: 289 HLIGKLPSCVRSNSSNLTVISSWNCLSGGNLGYQLPNSVCRKEALA 334


>emb|CBI32004.3| unnamed protein product [Vitis vinifera]
          Length = 720

 Score =  134 bits (338), Expect = 6e-30
 Identities = 65/106 (61%), Positives = 79/106 (74%)
 Frame = -2

Query: 318 FNQLQHLDISSNQLVGPIPSTLFSLPSIHYINLAGNRLSGALPTNLSCSNELEHVDLSNN 139
           F++LQ  DISSN+ VGPIPS++F LPSI Y+NLA N+ +GA  TN+SCS  L  VD+S+N
Sbjct: 215 FDRLQQFDISSNKFVGPIPSSIFYLPSIQYLNLAKNQFTGAFQTNISCSGNLRFVDISHN 274

Query: 138 LLIGKLPLCIVSNSSSRVLFYSWNCLSAGNSKYQHPYSFCHKEALA 1
            LIGKLP C+ SNSS+  +  SWNCLS GN  YQ P S C KEALA
Sbjct: 275 HLIGKLPSCVRSNSSNLTVISSWNCLSGGNLGYQLPNSVCRKEALA 320


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