BLASTX nr result
ID: Coptis24_contig00039888
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00039888 (320 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 119 3e-25 emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 119 3e-25 gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc... 115 4e-24 ref|XP_002489126.1| hypothetical protein SORBIDRAFT_0019s003280 ... 115 5e-24 gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group... 115 5e-24 >emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] Length = 1449 Score = 119 bits (297), Expect = 3e-25 Identities = 60/105 (57%), Positives = 76/105 (72%) Frame = +3 Query: 6 SQTKYTLDLLRRSTMTECKPCSTPLSAKTQLSCLDGDPLSDATEFRQLVGSLQCLTLTRP 185 SQ KYT DLL R+ M + KP +TP LS LDG+P SDAT +R VG+LQ LTLTRP Sbjct: 1098 SQHKYTQDLLSRTAMLDSKPATTPGLLGQTLSHLDGEPFSDATLYRSTVGALQYLTLTRP 1157 Query: 186 DIAYAVHHVAQFMSAPSTTHLIAVKRILLYLKGSVDYGLDFGRST 320 DI++AV+ QFM+ P+TTH +AVKRIL YLKG++ YG+ +ST Sbjct: 1158 DISFAVNKACQFMATPTTTHWLAVKRILRYLKGTLSYGIQMQQST 1202 >emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] Length = 1271 Score = 119 bits (297), Expect = 3e-25 Identities = 60/105 (57%), Positives = 76/105 (72%) Frame = +3 Query: 6 SQTKYTLDLLRRSTMTECKPCSTPLSAKTQLSCLDGDPLSDATEFRQLVGSLQCLTLTRP 185 SQ KYT DLL R+ M + KP +TP LS LDG+P SDAT +R VG+LQ LTLTRP Sbjct: 956 SQHKYTQDLLSRTAMLDSKPATTPGLLGQTLSHLDGEPFSDATLYRSTVGALQYLTLTRP 1015 Query: 186 DIAYAVHHVAQFMSAPSTTHLIAVKRILLYLKGSVDYGLDFGRST 320 DI++AV+ QFM+ P+TTH +AVKRIL YLKG++ YG+ +ST Sbjct: 1016 DISFAVNKACQFMATPTTTHWLAVKRILRYLKGTLSYGIQMQQST 1060 >gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 900 Score = 115 bits (288), Expect = 4e-24 Identities = 60/107 (56%), Positives = 76/107 (71%), Gaps = 2/107 (1%) Frame = +3 Query: 6 SQTKYTLDLLRRSTMTECKPCSTPLSAKTQLSCLDGDPL--SDATEFRQLVGSLQCLTLT 179 SQ +YT +LL R MT CKP STPLS +LS GD L SD T++R +VG+LQ LTLT Sbjct: 628 SQERYTTELLERVNMTSCKPVSTPLSTAEKLSVEIGDELGPSDVTQYRSIVGALQYLTLT 687 Query: 180 RPDIAYAVHHVAQFMSAPSTTHLIAVKRILLYLKGSVDYGLDFGRST 320 RPDI+Y+V+ V QF+ P+T H AVKRIL YLKG++D GL +S+ Sbjct: 688 RPDISYSVNKVCQFLQTPTTAHWSAVKRILRYLKGTLDLGLKIVKSS 734 >ref|XP_002489126.1| hypothetical protein SORBIDRAFT_0019s003280 [Sorghum bicolor] gi|241947225|gb|EES20370.1| hypothetical protein SORBIDRAFT_0019s003280 [Sorghum bicolor] Length = 761 Score = 115 bits (287), Expect = 5e-24 Identities = 55/105 (52%), Positives = 73/105 (69%) Frame = +3 Query: 6 SQTKYTLDLLRRSTMTECKPCSTPLSAKTQLSCLDGDPLSDATEFRQLVGSLQCLTLTRP 185 SQ +YTLD++ R+ M++CKPCSTP+ ++S DG ++D T +R L G+LQ LT TRP Sbjct: 491 SQRQYTLDIITRNGMSDCKPCSTPVDTCAKVSASDGPSVTDPTAYRSLAGALQYLTFTRP 550 Query: 186 DIAYAVHHVAQFMSAPSTTHLIAVKRILLYLKGSVDYGLDFGRST 320 DIAYAV + M P +HL A KRIL YLKG++DYGL RS+ Sbjct: 551 DIAYAVQQICLHMHDPRESHLTAAKRILRYLKGTLDYGLVIPRSS 595 >gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group] gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza sativa Japonica Group] Length = 1679 Score = 115 bits (287), Expect = 5e-24 Identities = 55/105 (52%), Positives = 72/105 (68%) Frame = +3 Query: 6 SQTKYTLDLLRRSTMTECKPCSTPLSAKTQLSCLDGDPLSDATEFRQLVGSLQCLTLTRP 185 SQ +Y +D+L R+ M +CKPC+TP+ +LS DG P++D T+FR L G+LQ LT TRP Sbjct: 1419 SQRQYCIDILERAGMADCKPCNTPVDTTAKLSSSDGPPVADPTDFRSLAGALQYLTFTRP 1478 Query: 186 DIAYAVHHVAQFMSAPSTTHLIAVKRILLYLKGSVDYGLDFGRST 320 DI+YAV V M P HL A+KRIL Y++GSVD GL RS+ Sbjct: 1479 DISYAVQQVCLHMHDPREPHLAALKRILHYIRGSVDLGLHIQRSS 1523