BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039888
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]   119   3e-25
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]   119   3e-25
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc...   115   4e-24
ref|XP_002489126.1| hypothetical protein SORBIDRAFT_0019s003280 ...   115   5e-24
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group...   115   5e-24

>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/105 (57%), Positives = 76/105 (72%)
 Frame = +3

Query: 6    SQTKYTLDLLRRSTMTECKPCSTPLSAKTQLSCLDGDPLSDATEFRQLVGSLQCLTLTRP 185
            SQ KYT DLL R+ M + KP +TP      LS LDG+P SDAT +R  VG+LQ LTLTRP
Sbjct: 1098 SQHKYTQDLLSRTAMLDSKPATTPGLLGQTLSHLDGEPFSDATLYRSTVGALQYLTLTRP 1157

Query: 186  DIAYAVHHVAQFMSAPSTTHLIAVKRILLYLKGSVDYGLDFGRST 320
            DI++AV+   QFM+ P+TTH +AVKRIL YLKG++ YG+   +ST
Sbjct: 1158 DISFAVNKACQFMATPTTTHWLAVKRILRYLKGTLSYGIQMQQST 1202


>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/105 (57%), Positives = 76/105 (72%)
 Frame = +3

Query: 6    SQTKYTLDLLRRSTMTECKPCSTPLSAKTQLSCLDGDPLSDATEFRQLVGSLQCLTLTRP 185
            SQ KYT DLL R+ M + KP +TP      LS LDG+P SDAT +R  VG+LQ LTLTRP
Sbjct: 956  SQHKYTQDLLSRTAMLDSKPATTPGLLGQTLSHLDGEPFSDATLYRSTVGALQYLTLTRP 1015

Query: 186  DIAYAVHHVAQFMSAPSTTHLIAVKRILLYLKGSVDYGLDFGRST 320
            DI++AV+   QFM+ P+TTH +AVKRIL YLKG++ YG+   +ST
Sbjct: 1016 DISFAVNKACQFMATPTTTHWLAVKRILRYLKGTLSYGIQMQQST 1060


>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 900

 Score =  115 bits (288), Expect = 4e-24
 Identities = 60/107 (56%), Positives = 76/107 (71%), Gaps = 2/107 (1%)
 Frame = +3

Query: 6   SQTKYTLDLLRRSTMTECKPCSTPLSAKTQLSCLDGDPL--SDATEFRQLVGSLQCLTLT 179
           SQ +YT +LL R  MT CKP STPLS   +LS   GD L  SD T++R +VG+LQ LTLT
Sbjct: 628 SQERYTTELLERVNMTSCKPVSTPLSTAEKLSVEIGDELGPSDVTQYRSIVGALQYLTLT 687

Query: 180 RPDIAYAVHHVAQFMSAPSTTHLIAVKRILLYLKGSVDYGLDFGRST 320
           RPDI+Y+V+ V QF+  P+T H  AVKRIL YLKG++D GL   +S+
Sbjct: 688 RPDISYSVNKVCQFLQTPTTAHWSAVKRILRYLKGTLDLGLKIVKSS 734


>ref|XP_002489126.1| hypothetical protein SORBIDRAFT_0019s003280 [Sorghum bicolor]
           gi|241947225|gb|EES20370.1| hypothetical protein
           SORBIDRAFT_0019s003280 [Sorghum bicolor]
          Length = 761

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/105 (52%), Positives = 73/105 (69%)
 Frame = +3

Query: 6   SQTKYTLDLLRRSTMTECKPCSTPLSAKTQLSCLDGDPLSDATEFRQLVGSLQCLTLTRP 185
           SQ +YTLD++ R+ M++CKPCSTP+    ++S  DG  ++D T +R L G+LQ LT TRP
Sbjct: 491 SQRQYTLDIITRNGMSDCKPCSTPVDTCAKVSASDGPSVTDPTAYRSLAGALQYLTFTRP 550

Query: 186 DIAYAVHHVAQFMSAPSTTHLIAVKRILLYLKGSVDYGLDFGRST 320
           DIAYAV  +   M  P  +HL A KRIL YLKG++DYGL   RS+
Sbjct: 551 DIAYAVQQICLHMHDPRESHLTAAKRILRYLKGTLDYGLVIPRSS 595


>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1679

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/105 (52%), Positives = 72/105 (68%)
 Frame = +3

Query: 6    SQTKYTLDLLRRSTMTECKPCSTPLSAKTQLSCLDGDPLSDATEFRQLVGSLQCLTLTRP 185
            SQ +Y +D+L R+ M +CKPC+TP+    +LS  DG P++D T+FR L G+LQ LT TRP
Sbjct: 1419 SQRQYCIDILERAGMADCKPCNTPVDTTAKLSSSDGPPVADPTDFRSLAGALQYLTFTRP 1478

Query: 186  DIAYAVHHVAQFMSAPSTTHLIAVKRILLYLKGSVDYGLDFGRST 320
            DI+YAV  V   M  P   HL A+KRIL Y++GSVD GL   RS+
Sbjct: 1479 DISYAVQQVCLHMHDPREPHLAALKRILHYIRGSVDLGLHIQRSS 1523