BLASTX nr result

ID: Coptis24_contig00039882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039882
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37270.3| unnamed protein product [Vitis vinifera]              113   2e-23
ref|XP_002301771.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_002521118.1| conserved hypothetical protein [Ricinus comm...    96   3e-18
ref|XP_003623190.1| hypothetical protein MTR_7g065510 [Medicago ...    91   1e-16
ref|XP_003623189.1| hypothetical protein MTR_7g065510 [Medicago ...    91   1e-16

>emb|CBI37270.3| unnamed protein product [Vitis vinifera]
          Length = 475

 Score =  113 bits (282), Expect = 2e-23
 Identities = 59/97 (60%), Positives = 72/97 (74%)
 Frame = +3

Query: 54  GRDMGHQVDLAAHVGNKVLPISDATAISACKITNYQCWSSAKKDELKGDKNRAISRMKEL 233
           G  +G + D AAHVGNKVLPISD T +S+   TN Q  +S KK+ +KGDK +AISRMKEL
Sbjct: 307 GLGIGLKGDSAAHVGNKVLPISDTT-LSSSTNTNEQWGTSEKKERIKGDKTKAISRMKEL 365

Query: 234 WKWAATAKSDKGGKYIRRKVQHFRNRGTAKDSLQDDQ 344
           ++WAA  KS+KGGK+I RKV HFRNRG+ K    DDQ
Sbjct: 366 FRWAAATKSEKGGKFIGRKVLHFRNRGSLKPVPDDDQ 402


>ref|XP_002301771.1| predicted protein [Populus trichocarpa] gi|222843497|gb|EEE81044.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  105 bits (262), Expect = 4e-21
 Identities = 57/102 (55%), Positives = 73/102 (71%)
 Frame = +3

Query: 39  EGKEEGRDMGHQVDLAAHVGNKVLPISDATAISACKITNYQCWSSAKKDELKGDKNRAIS 218
           E    G+   ++VD AAH GNKVLP+SD T +S+   TN +C +  KKD++KGDK +AIS
Sbjct: 5   ETAARGQVTSNKVDPAAHAGNKVLPVSDTT-LSSSASTNEKCSTLEKKDKVKGDKAKAIS 63

Query: 219 RMKELWKWAATAKSDKGGKYIRRKVQHFRNRGTAKDSLQDDQ 344
           RMKEL +WAATAKS+K GKYI RKV   R+R T K S+ DD+
Sbjct: 64  RMKELLRWAATAKSEKAGKYIGRKVLQLRSRATLK-SVPDDE 104


>ref|XP_002521118.1| conserved hypothetical protein [Ricinus communis]
           gi|223539687|gb|EEF41269.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 271

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 55/120 (45%), Positives = 80/120 (66%), Gaps = 6/120 (5%)
 Frame = +3

Query: 3   FRNKQQYSVHTFEGKEE----GRDMGH-QVDLAA-HVGNKVLPISDATAISACKITNYQC 164
           +  +Q++ +++ + K+E    G  M + +VD    HVGNKVLP++DAT +S+    N QC
Sbjct: 92  YNRRQKHWMYSMKMKKEDIVKGEGMSNSKVDSTNNHVGNKVLPVADAT-LSSSTSANDQC 150

Query: 165 WSSAKKDELKGDKNRAISRMKELWKWAATAKSDKGGKYIRRKVQHFRNRGTAKDSLQDDQ 344
            S  K ++LKGDK +A+SRMKEL +WAA AK +K GK++ RKV HFRN+ T K    D+Q
Sbjct: 151 SSLEKVEKLKGDKAKAMSRMKELLRWAAAAKPEKRGKFLGRKVLHFRNKATFKAVADDEQ 210


>ref|XP_003623190.1| hypothetical protein MTR_7g065510 [Medicago truncatula]
           gi|355498205|gb|AES79408.1| hypothetical protein
           MTR_7g065510 [Medicago truncatula]
          Length = 183

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 49/103 (47%), Positives = 66/103 (64%), Gaps = 3/103 (2%)
 Frame = +3

Query: 45  KEEGRDMG--HQVDLAAHVGNKVLPISDATAISACKITNYQCWSSAKKDELKGDKNRAIS 218
           +E  RD G  ++ D   H GNKVLPI+    +S+    N QC ++  KD++KGD+ + +S
Sbjct: 6   EESSRDEGIVNKTDSTTHGGNKVLPITQEAPLSSSAERNDQCDNTITKDQVKGDRKKPMS 65

Query: 219 RMKELWKW-AATAKSDKGGKYIRRKVQHFRNRGTAKDSLQDDQ 344
           RMKEL +W AA+AK+DKGGK+  RKV  FR RG  K    DDQ
Sbjct: 66  RMKELLRWAAASAKTDKGGKFYGRKVLMFRRRGNLKAVQDDDQ 108


>ref|XP_003623189.1| hypothetical protein MTR_7g065510 [Medicago truncatula]
           gi|355498204|gb|AES79407.1| hypothetical protein
           MTR_7g065510 [Medicago truncatula]
          Length = 274

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 49/103 (47%), Positives = 66/103 (64%), Gaps = 3/103 (2%)
 Frame = +3

Query: 45  KEEGRDMG--HQVDLAAHVGNKVLPISDATAISACKITNYQCWSSAKKDELKGDKNRAIS 218
           +E  RD G  ++ D   H GNKVLPI+    +S+    N QC ++  KD++KGD+ + +S
Sbjct: 97  EESSRDEGIVNKTDSTTHGGNKVLPITQEAPLSSSAERNDQCDNTITKDQVKGDRKKPMS 156

Query: 219 RMKELWKW-AATAKSDKGGKYIRRKVQHFRNRGTAKDSLQDDQ 344
           RMKEL +W AA+AK+DKGGK+  RKV  FR RG  K    DDQ
Sbjct: 157 RMKELLRWAAASAKTDKGGKFYGRKVLMFRRRGNLKAVQDDDQ 199


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