BLASTX nr result
ID: Coptis24_contig00039851
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00039851 (329 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270999.2| PREDICTED: exopolygalacturonase clone GBGE18... 125 5e-27 emb|CBI22963.3| unnamed protein product [Vitis vinifera] 125 5e-27 emb|CAN69218.1| hypothetical protein VITISV_012014 [Vitis vinifera] 125 5e-27 ref|XP_002438528.1| hypothetical protein SORBIDRAFT_10g021590 [S... 123 2e-26 ref|XP_003563839.1| PREDICTED: exopolygalacturonase-like [Brachy... 119 3e-25 >ref|XP_002270999.2| PREDICTED: exopolygalacturonase clone GBGE184-like [Vitis vinifera] Length = 388 Score = 125 bits (313), Expect = 5e-27 Identities = 60/102 (58%), Positives = 68/102 (66%) Frame = +3 Query: 24 SNATVSNITLLNSKQYHMNFLDSSNIVVSHINITAPGNSPNTDGXXXXXXXXXXXXXXXX 203 +N +SNITL N K +HM ++S N+ V +NITAP NSPNTDG Sbjct: 147 TNGNISNITLKNGKGFHMGIINSDNVTVHGVNITAPWNSPNTDGVHIGYSTNIHITSSTI 206 Query: 204 GVGDDCVSIGQGSTNINVFGLRCGPGHGISVGSLGKYSREKD 329 GVGDDCVSIG GS NI VF +CGPGHGISVGSLGKYS EKD Sbjct: 207 GVGDDCVSIGPGSINITVFNTKCGPGHGISVGSLGKYSAEKD 248 >emb|CBI22963.3| unnamed protein product [Vitis vinifera] Length = 405 Score = 125 bits (313), Expect = 5e-27 Identities = 60/102 (58%), Positives = 68/102 (66%) Frame = +3 Query: 24 SNATVSNITLLNSKQYHMNFLDSSNIVVSHINITAPGNSPNTDGXXXXXXXXXXXXXXXX 203 +N +SNITL N K +HM ++S N+ V +NITAP NSPNTDG Sbjct: 166 TNGNISNITLKNGKGFHMGIINSDNVTVHGVNITAPWNSPNTDGVHIGYSTNIHITSSTI 225 Query: 204 GVGDDCVSIGQGSTNINVFGLRCGPGHGISVGSLGKYSREKD 329 GVGDDCVSIG GS NI VF +CGPGHGISVGSLGKYS EKD Sbjct: 226 GVGDDCVSIGPGSINITVFNTKCGPGHGISVGSLGKYSAEKD 267 >emb|CAN69218.1| hypothetical protein VITISV_012014 [Vitis vinifera] Length = 863 Score = 125 bits (313), Expect = 5e-27 Identities = 60/102 (58%), Positives = 68/102 (66%) Frame = +3 Query: 24 SNATVSNITLLNSKQYHMNFLDSSNIVVSHINITAPGNSPNTDGXXXXXXXXXXXXXXXX 203 +N +SNITL N K +HM ++S N+ V +NITAP NSPNTDG Sbjct: 624 TNGNISNITLKNGKGFHMGIINSDNVTVHGVNITAPWNSPNTDGVHIGYSTNIHITSSTI 683 Query: 204 GVGDDCVSIGQGSTNINVFGLRCGPGHGISVGSLGKYSREKD 329 GVGDDCVSIG GS NI VF +CGPGHGISVGSLGKYS EKD Sbjct: 684 GVGDDCVSIGPGSINITVFNTKCGPGHGISVGSLGKYSAEKD 725 Score = 98.6 bits (244), Expect = 5e-19 Identities = 48/108 (44%), Positives = 62/108 (57%) Frame = +3 Query: 6 IRFQRASNATVSNITLLNSKQYHMNFLDSSNIVVSHINITAPGNSPNTDGXXXXXXXXXX 185 I+F +N + I +N+K +H+ N + ITAP +SPNTDG Sbjct: 180 IKFNSITNGNLRGINSVNAKSFHIAMNRCQNFRAFGLXITAPEDSPNTDGIHISSSNFVK 239 Query: 186 XXXXXXGVGDDCVSIGQGSTNINVFGLRCGPGHGISVGSLGKYSREKD 329 GDDC+SIGQGSTNI++ + CGPGHGIS+GSLGKY EKD Sbjct: 240 VSKSIISTGDDCISIGQGSTNISINKVTCGPGHGISIGSLGKYPDEKD 287 >ref|XP_002438528.1| hypothetical protein SORBIDRAFT_10g021590 [Sorghum bicolor] gi|241916751|gb|EER89895.1| hypothetical protein SORBIDRAFT_10g021590 [Sorghum bicolor] Length = 422 Score = 123 bits (308), Expect = 2e-26 Identities = 58/102 (56%), Positives = 68/102 (66%) Frame = +3 Query: 24 SNATVSNITLLNSKQYHMNFLDSSNIVVSHINITAPGNSPNTDGXXXXXXXXXXXXXXXX 203 +NATVS ITLLNSK +HMN + + + +TAPG+SPNTDG Sbjct: 182 NNATVSGITLLNSKFFHMNVFQCKGVTIKDVTVTAPGDSPNTDGIHIGDSSKVTITGTTI 241 Query: 204 GVGDDCVSIGQGSTNINVFGLRCGPGHGISVGSLGKYSREKD 329 GVGDDC+SIG GST INV G+ CGPGHGISVGSLG+Y EKD Sbjct: 242 GVGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKD 283 >ref|XP_003563839.1| PREDICTED: exopolygalacturonase-like [Brachypodium distachyon] Length = 427 Score = 119 bits (298), Expect = 3e-25 Identities = 53/102 (51%), Positives = 67/102 (65%) Frame = +3 Query: 24 SNATVSNITLLNSKQYHMNFLDSSNIVVSHINITAPGNSPNTDGXXXXXXXXXXXXXXXX 203 +N T+S ITLLN+K +HMN + + + +TAPG+SPNTDG Sbjct: 187 TNGTISGITLLNAKFFHMNVFQCKGVTIEDVTVTAPGDSPNTDGIHIGDSSGITITGTTI 246 Query: 204 GVGDDCVSIGQGSTNINVFGLRCGPGHGISVGSLGKYSREKD 329 GVGDDC+SIG GST IN+ G+ CGPGHGIS+GSLG+Y EKD Sbjct: 247 GVGDDCISIGPGSTKINITGVTCGPGHGISIGSLGRYKDEKD 288