BLASTX nr result

ID: Coptis24_contig00039849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039849
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_005090364.1| ribosomal protein S7 (mitochondrion) [Phoeni...   143   2e-32
ref|YP_398426.1| rps7 [Triticum aestivum] gi|94502604|ref|YP_588...   142   4e-32
ref|YP_004237260.1| ribosomal protein S7 (mitochondrion) [Ricinu...   141   6e-32
ref|YP_002608360.1| ribosomal protein S7 [Vitis vinifera] gi|209...   140   1e-31
ref|YP_762339.1| ribosomal protein S7 [Sorghum bicolor] gi|11430...   139   2e-31

>ref|YP_005090364.1| ribosomal protein S7 (mitochondrion) [Phoenix dactylifera]
           gi|343478416|gb|AEM43904.1| ribosomal protein S7
           (mitochondrion) [Phoenix dactylifera]
          Length = 148

 Score =  143 bits (360), Expect = 2e-32
 Identities = 68/70 (97%), Positives = 70/70 (100%)
 Frame = +3

Query: 3   VARDRQQTLAIRWILGAAFKRRISYKISLEKCSFAEILDAYRKRGIARKKRENLHGLAST 182
           VARDRQQTLAIRWILGAAFKRRISY+ISLEKCSFAEILDAYRKRGIARK+RENLHGLAST
Sbjct: 79  VARDRQQTLAIRWILGAAFKRRISYRISLEKCSFAEILDAYRKRGIARKRRENLHGLAST 138

Query: 183 NRSFAHFRWW 212
           NRSFAHFRWW
Sbjct: 139 NRSFAHFRWW 148


>ref|YP_398426.1| rps7 [Triticum aestivum] gi|94502604|ref|YP_588404.1| ribosomal
           protein S7 [Zea mays subsp. mays]
           gi|114151589|ref|YP_740376.1| ribosomal protein S7 [Zea
           perennis] gi|114151621|ref|YP_740447.1| hypothetical
           protein ZelupMp27 [Zea luxurians]
           gi|114151656|ref|YP_740414.1| hypothetical protein
           ZemapapMp39 [Zea mays subsp. parviglumis]
           gi|115278627|ref|YP_762507.1| ribosomal protein S7
           [Tripsacum dactyloides] gi|266982|sp|Q01902.1|RT07_WHEAT
           RecName: Full=Ribosomal protein S7, mitochondrial
           gi|14348|emb|CAA47667.1| ribosomal protein S7 [Triticum
           aestivum] gi|40795043|gb|AAR91087.1| ribosomal protein
           S7 (mitochondrion) [Zea mays]
           gi|78675268|dbj|BAE47693.1| rps7 [Triticum aestivum]
           gi|93116062|gb|ABE98695.1| ribosomal protein S7
           (mitochondrion) [Zea mays subsp. mays]
           gi|93116106|gb|ABE98738.1| ribosomal protein S7
           (mitochondrion) [Zea mays subsp. mays]
           gi|93116155|gb|ABE98786.1| hypothetical protein [Zea
           mays subsp. mays] gi|102567923|gb|ABF70840.1| ribosomal
           protein S7 (mitochondrion) [Zea perennis]
           gi|102567989|gb|ABF70873.1| hypothetical protein
           (mitochondrion) [Zea mays subsp. parviglumis]
           gi|102579655|gb|ABF70935.1| ribosomal protein S7
           (mitochondrion) [Zea mays subsp. mays]
           gi|110287617|gb|ABG65663.1| hypothetical protein
           (mitochondrion) [Zea luxurians]
           gi|114432118|gb|ABI74667.1| ribosomal protein S7
           (mitochondrion) [Tripsacum dactyloides]
           gi|164422239|gb|ABY55212.1| ribosomal protein S7
           [Bambusa oldhamii] gi|169649077|gb|ACA62638.1| rps7
           [Triticum aestivum] gi|291498632|gb|ADE08106.1| rps7
           [Triticum aestivum] gi|302122832|gb|ADK93082.1| S7
           ribosomal protein (mitochondrion) [Lolium multiflorum]
           gi|302122834|gb|ADK93083.1| S7 ribosomal protein
           [Hordeum vulgare] gi|302122838|gb|ADK93085.1| S7
           ribosomal protein [Bromus inermis]
           gi|340748035|gb|AEK66752.1| ribosomal protein S7
           [Ferrocalamus rimosivaginus] gi|372861941|gb|AEX98092.1|
           ribosomal protein S7 (mitochondrion) [Ferrocalamus
           rimosivaginus] gi|413954233|gb|AFW86882.1| putative
           uncharacterized protein rps7 [Zea mays]
           gi|413954262|gb|AFW86911.1| putative uncharacterized
           protein rps7 [Zea mays] gi|414871165|tpg|DAA49722.1|
           TPA: putative uncharacterized protein rps7 [Zea mays]
           gi|445068|prf||1908383A ribosomal protein S7
          Length = 148

 Score =  142 bits (357), Expect = 4e-32
 Identities = 67/70 (95%), Positives = 70/70 (100%)
 Frame = +3

Query: 3   VARDRQQTLAIRWILGAAFKRRISYKISLEKCSFAEILDAYRKRGIARKKRENLHGLAST 182
           VARDRQQTLAIRWILGAAFKRRISY+ISLEKCSFAEILDAYRKRGI+RK+RENLHGLAST
Sbjct: 79  VARDRQQTLAIRWILGAAFKRRISYRISLEKCSFAEILDAYRKRGISRKRRENLHGLAST 138

Query: 183 NRSFAHFRWW 212
           NRSFAHFRWW
Sbjct: 139 NRSFAHFRWW 148


>ref|YP_004237260.1| ribosomal protein S7 (mitochondrion) [Ricinus communis]
           gi|322394267|gb|ADW96024.1| ribosomal protein S7
           (mitochondrion) [Ricinus communis]
          Length = 148

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/70 (97%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   VARDRQQTLAIRWILGAAFKRRISYKISLEKCSFAEILDAYRKRGIARKKRENLHGLAST 182
           VARDRQQTLAIRWIL AAFKRRISY+ISLEKCSFAEILDAYRKRGIARKKRENLHGLAST
Sbjct: 79  VARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIARKKRENLHGLAST 138

Query: 183 NRSFAHFRWW 212
           NRSFAHFRWW
Sbjct: 139 NRSFAHFRWW 148


>ref|YP_002608360.1| ribosomal protein S7 [Vitis vinifera] gi|209954157|emb|CAQ77594.1|
           ribosomal protein S7 [Vitis vinifera]
           gi|239764775|gb|ACS15243.1| ribosomal protein S7 [Vitis
           vinifera]
          Length = 148

 Score =  140 bits (352), Expect = 1e-31
 Identities = 67/70 (95%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   VARDRQQTLAIRWILGAAFKRRISYKISLEKCSFAEILDAYRKRGIARKKRENLHGLAST 182
           VARDRQQTLAIRWIL AAFKRRISY+ISLEKCSFAEILDAYRKRGIARKKR+NLHGLAST
Sbjct: 79  VARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIARKKRDNLHGLAST 138

Query: 183 NRSFAHFRWW 212
           NRSFAHFRWW
Sbjct: 139 NRSFAHFRWW 148


>ref|YP_762339.1| ribosomal protein S7 [Sorghum bicolor] gi|114309678|gb|ABI60895.1|
           ribosomal protein S7 (mitochondrion) [Sorghum bicolor]
          Length = 148

 Score =  139 bits (351), Expect = 2e-31
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   VARDRQQTLAIRWILGAAFKRRISYKISLEKCSFAEILDAYRKRGIARKKRENLHGLAST 182
           VARDRQQTLAIRWILGAAFKRRISY+ISLEKCSF EILDAYRKRGI+RK+RENLHGLAST
Sbjct: 79  VARDRQQTLAIRWILGAAFKRRISYRISLEKCSFDEILDAYRKRGISRKRRENLHGLAST 138

Query: 183 NRSFAHFRWW 212
           NRSFAHFRWW
Sbjct: 139 NRSFAHFRWW 148


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