BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039848
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...   123   1e-26
gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]         121   7e-26
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...   121   7e-26
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...   114   6e-24
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...   112   3e-23

>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 1296

 Score =  123 bits (309), Expect = 1e-26
 Identities = 58/131 (44%), Positives = 87/131 (66%)
 Frame = -2

Query: 400 PSLDEDEKTNLLKGVDTDEIVTALKHMKSFKSPGPDGYQAFFFQHFWNLVGDQVSATVKX 221
           P+LD+  KT+L   +   E+  AL  MK +K+PGPDG+   FF+ +W++VGD V   V+ 
Sbjct: 417 PALDDTGKTSLTSPITKKEVFAALNSMKPYKAPGPDGFHCIFFKQYWHIVGDDVFHLVRS 476

Query: 220 XXXXXXXXXXLNHSFIALIPKIMNPSLPEHFRPISLTNVVYKIISKIIVNRLRPILQRII 41
                     ++++ IALIPKI +P+  + FRPISL N +YKII+K++V+RLRP L  +I
Sbjct: 477 AFLTGHFDPAISNTLIALIPKIDSPNTYKDFRPISLCNTLYKIITKVLVHRLRPFLNNLI 536

Query: 40  GPF*TAFLPKR 8
           GP+ ++FLP R
Sbjct: 537 GPYQSSFLPGR 547


>gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 1613

 Score =  121 bits (303), Expect = 7e-26
 Identities = 61/131 (46%), Positives = 82/131 (62%)
 Frame = -2

Query: 400  PSLDEDEKTNLLKGVDTDEIVTALKHMKSFKSPGPDGYQAFFFQHFWNLVGDQVSATVKX 221
            PSL+E    NL   V  +E+  A+ HM SFK+PGPDG+QAFFF+ +W ++G  V   VK 
Sbjct: 817  PSLNEKACNNLTAPVTMEEVKAAVFHMNSFKAPGPDGFQAFFFKEYWEIIGLDVWKMVKQ 876

Query: 220  XXXXXXXXXXLNHSFIALIPKIMNPSLPEHFRPISLTNVVYKIISKIIVNRLRPILQRII 41
                      +  + + LIPK+ +P   + FRPISL NVVYKII+K++VNRLRP L  I+
Sbjct: 877  AFSGVPLDPRMLETLLVLIPKVESPVSMKDFRPISLCNVVYKIITKVLVNRLRPHLAEIV 936

Query: 40   GPF*TAFLPKR 8
            GP    F+P R
Sbjct: 937  GPLQGGFIPGR 947


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score =  121 bits (303), Expect = 7e-26
 Identities = 58/133 (43%), Positives = 81/133 (60%)
 Frame = -2

Query: 400 PSLDEDEKTNLLKGVDTDEIVTALKHMKSFKSPGPDGYQAFFFQHFWNLVGDQVSATVKX 221
           P +  D+   +++ +   E+  ALK MK FK+PGPDG+Q  F+Q FW+LV   V   V  
Sbjct: 421 PQITADDFEKMMRPLSEVEVTLALKSMKPFKAPGPDGFQPLFYQRFWDLVKPNVMHLVSE 480

Query: 220 XXXXXXXXXXLNHSFIALIPKIMNPSLPEHFRPISLTNVVYKIISKIIVNRLRPILQRII 41
                      N +FI LIPK+  P L +HFRPI L N+VYKI++K+I+NRL+PIL  +I
Sbjct: 481 ILSGRDFPEGFNDTFIVLIPKMDIPQLAKHFRPIGLCNIVYKIVTKVIINRLKPILPSLI 540

Query: 40  GPF*TAFLPKRSI 2
            P   +F+P R I
Sbjct: 541 SPTQCSFVPNRQI 553


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/133 (43%), Positives = 81/133 (60%)
 Frame = -2

Query: 400 PSLDEDEKTNLLKGVDTDEIVTALKHMKSFKSPGPDGYQAFFFQHFWNLVGDQVSATVKX 221
           P + E+  T LLK    +E+  AL  M   K+PGPDG  A F+Q FW+++GD V+  V  
Sbjct: 418 PVVTEECNTWLLKPFSKEELYVALSQMHPCKAPGPDGMHAIFYQKFWHIIGDDVTQFVSS 477

Query: 220 XXXXXXXXXXLNHSFIALIPKIMNPSLPEHFRPISLTNVVYKIISKIIVNRLRPILQRII 41
                     +NH+ IALIPK+ NP+ P  FRPI+L NVVYK++SK +V RL+  L R++
Sbjct: 478 ILHGSISPSCINHTNIALIPKVKNPTTPAEFRPIALCNVVYKLVSKALVIRLKDFLPRLV 537

Query: 40  GPF*TAFLPKRSI 2
               +AF+P R I
Sbjct: 538 SENQSAFVPGRLI 550


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score =  112 bits (280), Expect = 3e-23
 Identities = 57/133 (42%), Positives = 78/133 (58%)
 Frame = -2

Query: 400 PSLDEDEKTNLLKGVDTDEIVTALKHMKSFKSPGPDGYQAFFFQHFWNLVGDQVSATVKX 221
           P + E +   L   V  +EI  A+  +   KSPGPDG+  +FFQ +W L+G  V   V+ 
Sbjct: 430 PIVSEADNAYLTSAVSPEEIKNAVFDLAPDKSPGPDGFPPYFFQKYWTLIGKSVCRAVQA 489

Query: 220 XXXXXXXXXXLNHSFIALIPKIMNPSLPEHFRPISLTNVVYKIISKIIVNRLRPILQRII 41
                     +NH+F+ALIPK+  P    HFRPISL + +YK+ISKII NRL+  L +II
Sbjct: 490 FFHSGYMLKEVNHTFLALIPKVDKPVNANHFRPISLCSTIYKVISKIITNRLKITLGKII 549

Query: 40  GPF*TAFLPKRSI 2
            P   AF+P+R I
Sbjct: 550 HPLQGAFIPERLI 562