BLASTX nr result

ID: Coptis24_contig00039837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039837
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634426.1| PREDICTED: transcription factor RAX3-like [V...   100   2e-19
emb|CBI19348.3| unnamed protein product [Vitis vinifera]              100   2e-19
emb|CAN62567.1| hypothetical protein VITISV_022764 [Vitis vinifera]   100   2e-19
ref|XP_002266801.2| PREDICTED: transcription factor RAX3 [Vitis ...    90   2e-16
emb|CBI41089.3| unnamed protein product [Vitis vinifera]               90   2e-16

>ref|XP_003634426.1| PREDICTED: transcription factor RAX3-like [Vitis vinifera]
          Length = 317

 Score =  100 bits (248), Expect = 2e-19
 Identities = 49/93 (52%), Positives = 62/93 (66%)
 Frame = -3

Query: 281 QRKEHQARRASYLKQDMKNGGDIPIYADLGMQTPYWPEPPMPISTPYPNQDNRFNDHASL 102
           QRKE QARR S  KQ+MK      + +D     PYWPE P+P   PYPN++ RFNDH+S+
Sbjct: 98  QRKEQQARRGSCPKQEMKRASGNAMVSDNENLNPYWPELPVPAPIPYPNEEPRFNDHSSI 157

Query: 101 KKLLIKLGGRFSDDHQQQNDNAKTDNLQFPLDI 3
           ++LLI+LGGRFSDD Q   +     NLQ P+DI
Sbjct: 158 RRLLIRLGGRFSDDGQPLQNGT---NLQLPIDI 187


>emb|CBI19348.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score =  100 bits (248), Expect = 2e-19
 Identities = 49/93 (52%), Positives = 62/93 (66%)
 Frame = -3

Query: 281 QRKEHQARRASYLKQDMKNGGDIPIYADLGMQTPYWPEPPMPISTPYPNQDNRFNDHASL 102
           QRKE QARR S  KQ+MK      + +D     PYWPE P+P   PYPN++ RFNDH+S+
Sbjct: 121 QRKEQQARRGSCPKQEMKRASGNAMVSDNENLNPYWPELPVPAPIPYPNEEPRFNDHSSI 180

Query: 101 KKLLIKLGGRFSDDHQQQNDNAKTDNLQFPLDI 3
           ++LLI+LGGRFSDD Q   +     NLQ P+DI
Sbjct: 181 RRLLIRLGGRFSDDGQPLQNGT---NLQLPIDI 210


>emb|CAN62567.1| hypothetical protein VITISV_022764 [Vitis vinifera]
          Length = 330

 Score =  100 bits (248), Expect = 2e-19
 Identities = 49/93 (52%), Positives = 62/93 (66%)
 Frame = -3

Query: 281 QRKEHQARRASYLKQDMKNGGDIPIYADLGMQTPYWPEPPMPISTPYPNQDNRFNDHASL 102
           QRKE QARR S  KQ+MK      + +D     PYWPE P+P   PYPN++ RFNDH+S+
Sbjct: 111 QRKEQQARRGSCPKQEMKRASGNAMVSDNENLNPYWPELPVPAPIPYPNEEPRFNDHSSI 170

Query: 101 KKLLIKLGGRFSDDHQQQNDNAKTDNLQFPLDI 3
           ++LLI+LGGRFSDD Q   +     NLQ P+DI
Sbjct: 171 RRLLIRLGGRFSDDGQPLQNGT---NLQLPIDI 200


>ref|XP_002266801.2| PREDICTED: transcription factor RAX3 [Vitis vinifera]
          Length = 316

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 50/94 (53%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
 Frame = -3

Query: 281 QRKEHQARRASYLKQDMKNGGDIPIYADLGM-QTPYWPEPPMPISTPYPNQDNRFNDHAS 105
           QRKE QARRA+Y+KQ+MK    I +  D  + + PYW E  +P  + +PNQD    D AS
Sbjct: 98  QRKEQQARRANYVKQEMKREPGIFVVPDQAVGRNPYWAE--LPAVSVHPNQDPDIKDQAS 155

Query: 104 LKKLLIKLGGRFSDDHQQQNDNAKTDNLQFPLDI 3
           +KKLLIKLGGRF DD QQ   N  + N Q+PLDI
Sbjct: 156 IKKLLIKLGGRFGDDGQQPGSN--SINFQYPLDI 187


>emb|CBI41089.3| unnamed protein product [Vitis vinifera]
          Length = 339

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 50/94 (53%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
 Frame = -3

Query: 281 QRKEHQARRASYLKQDMKNGGDIPIYADLGM-QTPYWPEPPMPISTPYPNQDNRFNDHAS 105
           QRKE QARRA+Y+KQ+MK    I +  D  + + PYW E  +P  + +PNQD    D AS
Sbjct: 121 QRKEQQARRANYVKQEMKREPGIFVVPDQAVGRNPYWAE--LPAVSVHPNQDPDIKDQAS 178

Query: 104 LKKLLIKLGGRFSDDHQQQNDNAKTDNLQFPLDI 3
           +KKLLIKLGGRF DD QQ   N  + N Q+PLDI
Sbjct: 179 IKKLLIKLGGRFGDDGQQPGSN--SINFQYPLDI 210


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