BLASTX nr result

ID: Coptis24_contig00039830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039830
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327655.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002529643.1| conserved hypothetical protein [Ricinus comm...    56   3e-06
ref|XP_004134853.1| PREDICTED: uncharacterized protein LOC101220...    56   4e-06
emb|CAN75795.1| hypothetical protein VITISV_024890 [Vitis vinifera]    55   6e-06

>ref|XP_002327655.1| predicted protein [Populus trichocarpa] gi|222836740|gb|EEE75133.1|
           predicted protein [Populus trichocarpa]
          Length = 454

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/58 (53%), Positives = 42/58 (72%)
 Frame = -3

Query: 196 EECDNKNAEALPDTRAFEEAIIAAVLGPTEPKAKTLDTKKVNKRLRVFEDITHSLSPR 23
           +E ++K ++ LPD   F+EAI+AA+LGP     KT   KK+ KRL+VF+DIT SLSPR
Sbjct: 396 DETEDKLSQLLPDNDDFDEAILAAILGPATNSRKTAVKKKIEKRLKVFQDITLSLSPR 453


>ref|XP_002529643.1| conserved hypothetical protein [Ricinus communis]
           gi|223530869|gb|EEF32730.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 482

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 13/71 (18%)
 Frame = -3

Query: 196 EECDNKNAEALPDTRAFEEAIIAAVLGPTEPKA--KTLDT-----------KKVNKRLRV 56
           +E +N  +E LPD + FE+AI+AAVLGPT      K ++T            K+ KRL+V
Sbjct: 411 DETENGLSELLPDNKDFEDAILAAVLGPTNEAGGRKPVETGSNNSTTAIFQTKIEKRLKV 470

Query: 55  FEDITHSLSPR 23
           F+DIT SLSPR
Sbjct: 471 FQDITLSLSPR 481


>ref|XP_004134853.1| PREDICTED: uncharacterized protein LOC101220568 [Cucumis sativus]
          Length = 500

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 36/73 (49%), Positives = 44/73 (60%), Gaps = 15/73 (20%)
 Frame = -3

Query: 196 EECDNKNAEALPDTRAFEEAIIAAVLGPTEPKAKTLDT---------------KKVNKRL 62
           EE D K AE LPD   FEEAI+AAVLG ++ +A+   T               +K+ KRL
Sbjct: 428 EETD-KWAEILPDDNDFEEAILAAVLGSSDDEAEKKTTANAGAGGGGGGGVIQRKIEKRL 486

Query: 61  RVFEDITHSLSPR 23
           +VFEDIT SLSPR
Sbjct: 487 KVFEDITLSLSPR 499


>emb|CAN75795.1| hypothetical protein VITISV_024890 [Vitis vinifera]
          Length = 471

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 9/67 (13%)
 Frame = -3

Query: 196 EECDNKNAEALPDTRAFEEAIIAAVLG-PTEPKAKTLDT--------KKVNKRLRVFEDI 44
           EE  +K A+ LPD++ FE A+IAAVLG  TE   KT++T         K+  RL+VF+DI
Sbjct: 404 EENGDKWADLLPDSKEFEAALIAAVLGSATETGKKTVETGNSSEILQNKIESRLKVFQDI 463

Query: 43  THSLSPR 23
           T S+SPR
Sbjct: 464 TLSMSPR 470


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