BLASTX nr result

ID: Coptis24_contig00039809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039809
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531699.1| conserved hypothetical protein [Ricinus comm...    78   6e-13
ref|XP_004149424.1| PREDICTED: uncharacterized protein LOC101220...    77   2e-12
ref|XP_003617957.1| hypothetical protein MTR_5g097370 [Medicago ...    75   4e-12
ref|XP_004144615.1| PREDICTED: uncharacterized protein LOC101210...    69   4e-10
ref|XP_002520030.1| conserved hypothetical protein [Ricinus comm...    65   7e-09

>ref|XP_002531699.1| conserved hypothetical protein [Ricinus communis]
           gi|223528675|gb|EEF30690.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 204

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 37/78 (47%), Positives = 56/78 (71%)
 Frame = -2

Query: 244 LNSDRNSLKDHGQLTFLMPDDAQLSSSAISREQLREFLLSHSLPTALPLNNLIHLPTGTI 65
           LN   NSL+D G++TFLMP D +LS  A+  E L++F+L HS+PTAL +++L+H P GT+
Sbjct: 56  LNGSPNSLRD-GEITFLMPSDEELSKVALRLESLQDFILGHSIPTALLISHLLHFPNGTL 114

Query: 64  MPSSFAANKTITITNHGR 11
           +P+    N+ + +TN GR
Sbjct: 115 VPTG-VPNRMLRVTNGGR 131


>ref|XP_004149424.1| PREDICTED: uncharacterized protein LOC101220860 [Cucumis sativus]
           gi|449496897|ref|XP_004160256.1| PREDICTED:
           uncharacterized LOC101220860 [Cucumis sativus]
          Length = 197

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/75 (53%), Positives = 54/75 (72%)
 Frame = -2

Query: 244 LNSDRNSLKDHGQLTFLMPDDAQLSSSAISREQLREFLLSHSLPTALPLNNLIHLPTGTI 65
           LNS   +L++   +TF MP D +LS + IS ++L EF+LSHS+PTAL LNNL+H P GT+
Sbjct: 47  LNSTTKTLQN-SNITFFMPTDQELSQADISPDRLEEFVLSHSIPTALLLNNLLHFPNGTL 105

Query: 64  MPSSFAANKTITITN 20
           +PSS   N+ I ITN
Sbjct: 106 VPSSI-PNRMIRITN 119


>ref|XP_003617957.1| hypothetical protein MTR_5g097370 [Medicago truncatula]
           gi|355519292|gb|AET00916.1| hypothetical protein
           MTR_5g097370 [Medicago truncatula]
          Length = 193

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 40/78 (51%), Positives = 57/78 (73%)
 Frame = -2

Query: 244 LNSDRNSLKDHGQLTFLMPDDAQLSSSAISREQLREFLLSHSLPTALPLNNLIHLPTGTI 65
           LNS  N ++++  LTFLMP+D  LS  +I+ E+L +FLLSHS+PT L LN+L+H P G+I
Sbjct: 51  LNSLPNQMQNN-DLTFLMPNDEDLSHFSIAPEELHDFLLSHSIPTPLLLNHLLHFPNGSI 109

Query: 64  MPSSFAANKTITITNHGR 11
           +PS    +K I+ITN+ R
Sbjct: 110 VPSGL-PSKVISITNNAR 126


>ref|XP_004144615.1| PREDICTED: uncharacterized protein LOC101210447 [Cucumis sativus]
           gi|449511819|ref|XP_004164062.1| PREDICTED:
           uncharacterized protein LOC101229762 [Cucumis sativus]
          Length = 192

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/74 (48%), Positives = 50/74 (67%)
 Frame = -2

Query: 244 LNSDRNSLKDHGQLTFLMPDDAQLSSSAISREQLREFLLSHSLPTALPLNNLIHLPTGTI 65
           LN+   +L++   +TF MP D +LS + IS +QL EF+L HS+PT L LNNL H P G++
Sbjct: 42  LNNSNKTLQN-SDITFFMPTDQELSQADISLDQLEEFVLRHSIPTTLLLNNLSHFPNGSL 100

Query: 64  MPSSFAANKTITIT 23
           +PSS   N+ I IT
Sbjct: 101 VPSSI-PNRMIKIT 113


>ref|XP_002520030.1| conserved hypothetical protein [Ricinus communis]
           gi|223540794|gb|EEF42354.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 245

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/70 (47%), Positives = 48/70 (68%)
 Frame = -2

Query: 211 GQLTFLMPDDAQLSSSAISREQLREFLLSHSLPTALPLNNLIHLPTGTIMPSSFAANKTI 32
           G +TFLMP+D  LS S I ++ L +FLL HS+P+ L  ++L H+P+G+ +PSS   +  +
Sbjct: 62  GNITFLMPNDRILSKSRIPQKSLADFLLHHSIPSPLLFDHLQHIPSGSTIPSS-DPDYML 120

Query: 31  TITNHGRLNF 2
            ITN GR NF
Sbjct: 121 DITNKGRRNF 130


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