BLASTX nr result
ID: Coptis24_contig00039786
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00039786 (266 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADD29950.1| ribosomal protein S3 [Trochodendron aralioides] 171 7e-41 gb|ADD29932.1| ribosomal protein S3 [Meliosma aff. cuneifolia Mo... 171 7e-41 ref|YP_002836129.1| ribosomal protein S3 [Megaleranthis saniculi... 170 1e-40 ref|YP_740689.1| ribosomal protein S3 [Nandina domestica] gi|122... 170 1e-40 ref|YP_007353953.1| ribosomal protein S3 (chloroplast) [Tectona ... 169 3e-40 >gb|ADD29950.1| ribosomal protein S3 [Trochodendron aralioides] Length = 218 Score = 171 bits (432), Expect = 7e-41 Identities = 86/88 (97%), Positives = 88/88 (100%) Frame = -1 Query: 266 RKLNIAITRVAKPYGQPNILAEFIAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQIAGR 87 RKLNIAITR+AKPYGQPNILAEFIAGQLKNRVSFRKA+KKAIELTEQADTKGIQVQIAGR Sbjct: 108 RKLNIAITRIAKPYGQPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGR 167 Query: 86 IDGKEIARVEWIREGRVPLQTIRAKIDY 3 IDGKEIARVEWIREGRVPLQTIRAKIDY Sbjct: 168 IDGKEIARVEWIREGRVPLQTIRAKIDY 195 >gb|ADD29932.1| ribosomal protein S3 [Meliosma aff. cuneifolia Moore 333] Length = 218 Score = 171 bits (432), Expect = 7e-41 Identities = 86/88 (97%), Positives = 88/88 (100%) Frame = -1 Query: 266 RKLNIAITRVAKPYGQPNILAEFIAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQIAGR 87 RKLNIAITR+AKPYGQPNILAEFIAGQLKNRVSFRKA+KKAIELTEQADTKGIQVQIAGR Sbjct: 108 RKLNIAITRIAKPYGQPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGR 167 Query: 86 IDGKEIARVEWIREGRVPLQTIRAKIDY 3 IDGKEIARVEWIREGRVPLQTIRAKIDY Sbjct: 168 IDGKEIARVEWIREGRVPLQTIRAKIDY 195 >ref|YP_002836129.1| ribosomal protein S3 [Megaleranthis saniculifolia] gi|226933921|gb|ACO92054.1| ribosomal protein S3 [Megaleranthis saniculifolia] Length = 218 Score = 170 bits (430), Expect = 1e-40 Identities = 86/88 (97%), Positives = 88/88 (100%) Frame = -1 Query: 266 RKLNIAITRVAKPYGQPNILAEFIAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQIAGR 87 RKLNIAITRV+KPYGQPNILAEFIAGQLKNRVSFRKA+KKAIELTEQADTKGIQVQIAGR Sbjct: 108 RKLNIAITRVSKPYGQPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGR 167 Query: 86 IDGKEIARVEWIREGRVPLQTIRAKIDY 3 IDGKEIARVEWIREGRVPLQTIRAKIDY Sbjct: 168 IDGKEIARVEWIREGRVPLQTIRAKIDY 195 >ref|YP_740689.1| ribosomal protein S3 [Nandina domestica] gi|122165923|sp|Q09FS2.1|RR3_NANDO RecName: Full=30S ribosomal protein S3, chloroplastic gi|114054510|gb|ABI49903.1| ribosomal protein S3 [Nandina domestica] Length = 218 Score = 170 bits (430), Expect = 1e-40 Identities = 86/88 (97%), Positives = 87/88 (98%) Frame = -1 Query: 266 RKLNIAITRVAKPYGQPNILAEFIAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQIAGR 87 RKLNIAITR+AKPYG PNILAEFIAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQIAGR Sbjct: 108 RKLNIAITRIAKPYGHPNILAEFIAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQIAGR 167 Query: 86 IDGKEIARVEWIREGRVPLQTIRAKIDY 3 IDGKEIARVEWIREGRVPLQTIRAKIDY Sbjct: 168 IDGKEIARVEWIREGRVPLQTIRAKIDY 195 >ref|YP_007353953.1| ribosomal protein S3 (chloroplast) [Tectona grandis] gi|438687642|emb|CCP47169.1| ribosomal protein S3 (chloroplast) [Tectona grandis] gi|438688326|emb|CCP47258.1| ribosomal protein S3 (chloroplast) [Tectona grandis] gi|438688450|emb|CCP47347.1| ribosomal protein S3 (chloroplast) [Tectona grandis] Length = 220 Score = 169 bits (427), Expect = 3e-40 Identities = 85/88 (96%), Positives = 87/88 (98%) Frame = -1 Query: 266 RKLNIAITRVAKPYGQPNILAEFIAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQIAGR 87 RKLNIAITR+AKPYG PNILAEFIAGQLKNRVSFRKA+KKAIELTEQADTKGIQVQIAGR Sbjct: 108 RKLNIAITRIAKPYGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGR 167 Query: 86 IDGKEIARVEWIREGRVPLQTIRAKIDY 3 IDGKEIARVEWIREGRVPLQTIRAKIDY Sbjct: 168 IDGKEIARVEWIREGRVPLQTIRAKIDY 195