BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039786
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADD29950.1| ribosomal protein S3 [Trochodendron aralioides]        171   7e-41
gb|ADD29932.1| ribosomal protein S3 [Meliosma aff. cuneifolia Mo...   171   7e-41
ref|YP_002836129.1| ribosomal protein S3 [Megaleranthis saniculi...   170   1e-40
ref|YP_740689.1| ribosomal protein S3 [Nandina domestica] gi|122...   170   1e-40
ref|YP_007353953.1| ribosomal protein S3 (chloroplast) [Tectona ...   169   3e-40

>gb|ADD29950.1| ribosomal protein S3 [Trochodendron aralioides]
          Length = 218

 Score =  171 bits (432), Expect = 7e-41
 Identities = 86/88 (97%), Positives = 88/88 (100%)
 Frame = -1

Query: 266 RKLNIAITRVAKPYGQPNILAEFIAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQIAGR 87
           RKLNIAITR+AKPYGQPNILAEFIAGQLKNRVSFRKA+KKAIELTEQADTKGIQVQIAGR
Sbjct: 108 RKLNIAITRIAKPYGQPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGR 167

Query: 86  IDGKEIARVEWIREGRVPLQTIRAKIDY 3
           IDGKEIARVEWIREGRVPLQTIRAKIDY
Sbjct: 168 IDGKEIARVEWIREGRVPLQTIRAKIDY 195


>gb|ADD29932.1| ribosomal protein S3 [Meliosma aff. cuneifolia Moore 333]
          Length = 218

 Score =  171 bits (432), Expect = 7e-41
 Identities = 86/88 (97%), Positives = 88/88 (100%)
 Frame = -1

Query: 266 RKLNIAITRVAKPYGQPNILAEFIAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQIAGR 87
           RKLNIAITR+AKPYGQPNILAEFIAGQLKNRVSFRKA+KKAIELTEQADTKGIQVQIAGR
Sbjct: 108 RKLNIAITRIAKPYGQPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGR 167

Query: 86  IDGKEIARVEWIREGRVPLQTIRAKIDY 3
           IDGKEIARVEWIREGRVPLQTIRAKIDY
Sbjct: 168 IDGKEIARVEWIREGRVPLQTIRAKIDY 195


>ref|YP_002836129.1| ribosomal protein S3 [Megaleranthis saniculifolia]
           gi|226933921|gb|ACO92054.1| ribosomal protein S3
           [Megaleranthis saniculifolia]
          Length = 218

 Score =  170 bits (430), Expect = 1e-40
 Identities = 86/88 (97%), Positives = 88/88 (100%)
 Frame = -1

Query: 266 RKLNIAITRVAKPYGQPNILAEFIAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQIAGR 87
           RKLNIAITRV+KPYGQPNILAEFIAGQLKNRVSFRKA+KKAIELTEQADTKGIQVQIAGR
Sbjct: 108 RKLNIAITRVSKPYGQPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGR 167

Query: 86  IDGKEIARVEWIREGRVPLQTIRAKIDY 3
           IDGKEIARVEWIREGRVPLQTIRAKIDY
Sbjct: 168 IDGKEIARVEWIREGRVPLQTIRAKIDY 195


>ref|YP_740689.1| ribosomal protein S3 [Nandina domestica]
           gi|122165923|sp|Q09FS2.1|RR3_NANDO RecName: Full=30S
           ribosomal protein S3, chloroplastic
           gi|114054510|gb|ABI49903.1| ribosomal protein S3
           [Nandina domestica]
          Length = 218

 Score =  170 bits (430), Expect = 1e-40
 Identities = 86/88 (97%), Positives = 87/88 (98%)
 Frame = -1

Query: 266 RKLNIAITRVAKPYGQPNILAEFIAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQIAGR 87
           RKLNIAITR+AKPYG PNILAEFIAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQIAGR
Sbjct: 108 RKLNIAITRIAKPYGHPNILAEFIAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQIAGR 167

Query: 86  IDGKEIARVEWIREGRVPLQTIRAKIDY 3
           IDGKEIARVEWIREGRVPLQTIRAKIDY
Sbjct: 168 IDGKEIARVEWIREGRVPLQTIRAKIDY 195


>ref|YP_007353953.1| ribosomal protein S3 (chloroplast) [Tectona grandis]
           gi|438687642|emb|CCP47169.1| ribosomal protein S3
           (chloroplast) [Tectona grandis]
           gi|438688326|emb|CCP47258.1| ribosomal protein S3
           (chloroplast) [Tectona grandis]
           gi|438688450|emb|CCP47347.1| ribosomal protein S3
           (chloroplast) [Tectona grandis]
          Length = 220

 Score =  169 bits (427), Expect = 3e-40
 Identities = 85/88 (96%), Positives = 87/88 (98%)
 Frame = -1

Query: 266 RKLNIAITRVAKPYGQPNILAEFIAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQIAGR 87
           RKLNIAITR+AKPYG PNILAEFIAGQLKNRVSFRKA+KKAIELTEQADTKGIQVQIAGR
Sbjct: 108 RKLNIAITRIAKPYGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGR 167

Query: 86  IDGKEIARVEWIREGRVPLQTIRAKIDY 3
           IDGKEIARVEWIREGRVPLQTIRAKIDY
Sbjct: 168 IDGKEIARVEWIREGRVPLQTIRAKIDY 195