BLASTX nr result

ID: Coptis24_contig00039781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039781
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY76931.1| hypothetical protein OsI_04889 [Oryza sativa Indi...   114   1e-23
ref|NP_001045168.1| Os01g0912900 [Oryza sativa Japonica Group] g...   114   1e-23
ref|XP_003567390.1| PREDICTED: putative pentatricopeptide repeat...   112   2e-23
tpg|DAA56180.1| TPA: hypothetical protein ZEAMMB73_301223 [Zea m...   111   7e-23
ref|XP_002458969.1| hypothetical protein SORBIDRAFT_03g043550 [S...   107   1e-21

>gb|EAY76931.1| hypothetical protein OsI_04889 [Oryza sativa Indica Group]
          Length = 565

 Score =  114 bits (284), Expect = 1e-23
 Identities = 52/78 (66%), Positives = 65/78 (83%)
 Frame = -3

Query: 235 GYAQNGRPNEALMLFRRMEEVGVKPDAVTMTSVISASAQLGGAELAHWIGSYVDREGIER 56
           GYAQ+G P E+L LFR ME  G++PDA TM  VISA++Q+G  ELA W+GSYVD++ IER
Sbjct: 250 GYAQSGVPKESLALFREMEAAGIEPDAATMVGVISAASQIGSTELAGWVGSYVDKKRIER 309

Query: 55  NEKVLTALLNMHAKCGNV 2
           N+KVLTAL++MHAKCGNV
Sbjct: 310 NDKVLTALVDMHAKCGNV 327


>ref|NP_001045168.1| Os01g0912900 [Oryza sativa Japonica Group]
           gi|20161377|dbj|BAB90301.1| selenium-binding
           protein-like [Oryza sativa Japonica Group]
           gi|113534699|dbj|BAF07082.1| Os01g0912900 [Oryza sativa
           Japonica Group] gi|125573076|gb|EAZ14591.1| hypothetical
           protein OsJ_04514 [Oryza sativa Japonica Group]
          Length = 533

 Score =  114 bits (284), Expect = 1e-23
 Identities = 52/78 (66%), Positives = 65/78 (83%)
 Frame = -3

Query: 235 GYAQNGRPNEALMLFRRMEEVGVKPDAVTMTSVISASAQLGGAELAHWIGSYVDREGIER 56
           GYAQ+G P E+L LFR ME  G++PDA TM  VISA++Q+G  ELA W+GSYVD++ IER
Sbjct: 250 GYAQSGVPKESLALFREMEAAGIEPDAATMVGVISAASQIGSTELAGWVGSYVDKKRIER 309

Query: 55  NEKVLTALLNMHAKCGNV 2
           N+KVLTAL++MHAKCGNV
Sbjct: 310 NDKVLTALVDMHAKCGNV 327


>ref|XP_003567390.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Brachypodium distachyon]
          Length = 531

 Score =  112 bits (281), Expect = 2e-23
 Identities = 51/78 (65%), Positives = 65/78 (83%)
 Frame = -3

Query: 235 GYAQNGRPNEALMLFRRMEEVGVKPDAVTMTSVISASAQLGGAELAHWIGSYVDREGIER 56
           GYAQ GRP E++ LFR +E VG++PDA TM  VIS+++Q+G   LA W+G+YVDR+ IER
Sbjct: 250 GYAQCGRPKESISLFRELEAVGIEPDAATMVGVISSASQIGSTALAGWVGNYVDRKRIER 309

Query: 55  NEKVLTALLNMHAKCGNV 2
           NEKVLTAL++MHAKCGNV
Sbjct: 310 NEKVLTALVDMHAKCGNV 327


>tpg|DAA56180.1| TPA: hypothetical protein ZEAMMB73_301223 [Zea mays]
          Length = 534

 Score =  111 bits (277), Expect = 7e-23
 Identities = 51/78 (65%), Positives = 62/78 (79%)
 Frame = -3

Query: 235 GYAQNGRPNEALMLFRRMEEVGVKPDAVTMTSVISASAQLGGAELAHWIGSYVDREGIER 56
           GYAQ GRP  AL LFR +E  G++PD  TM  VISA +Q+G  ELA W+G+YVDR+ IER
Sbjct: 251 GYAQTGRPKVALALFRDLEAAGIEPDGATMVGVISAVSQIGSTELAGWVGAYVDRKKIER 310

Query: 55  NEKVLTALLNMHAKCGNV 2
           NEKVLTAL++MHAKCGN+
Sbjct: 311 NEKVLTALVDMHAKCGNI 328


>ref|XP_002458969.1| hypothetical protein SORBIDRAFT_03g043550 [Sorghum bicolor]
           gi|241930944|gb|EES04089.1| hypothetical protein
           SORBIDRAFT_03g043550 [Sorghum bicolor]
          Length = 530

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/78 (62%), Positives = 61/78 (78%)
 Frame = -3

Query: 235 GYAQNGRPNEALMLFRRMEEVGVKPDAVTMTSVISASAQLGGAELAHWIGSYVDREGIER 56
           GYAQ G+P  AL LFR +E  G++PD  TM  VISA +Q+G  ELA W+G+YVDR+ IER
Sbjct: 251 GYAQTGQPKAALALFRDLEAAGIEPDGATMVGVISAVSQIGSTELAGWVGAYVDRKKIER 310

Query: 55  NEKVLTALLNMHAKCGNV 2
           N KVLTAL++MHAKCGN+
Sbjct: 311 NVKVLTALVDMHAKCGNI 328


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