BLASTX nr result

ID: Coptis24_contig00039771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039771
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509827.1| conserved hypothetical protein [Ricinus comm...    60   1e-07
ref|XP_002511376.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
ref|XP_002337260.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_002333429.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_002332257.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07

>ref|XP_002509827.1| conserved hypothetical protein [Ricinus communis]
           gi|223549726|gb|EEF51214.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 208

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/72 (40%), Positives = 43/72 (59%)
 Frame = -2

Query: 227 FFQIYHVDECQKVNIASLYFEGKADSWFLDYQEGKNLITWEELIVELYERFGDVTRDNYV 48
           +FQ+Y +   QK++IASLY   +AD W+  +Q       W +   EL  RFG++T ++ V
Sbjct: 131 YFQLYSIPNEQKIDIASLYLGDRADIWYQGWQAQTRSSDWGKFSEELCRRFGELTIEDVV 190

Query: 47  GEFNKLSQTATV 12
            EFNKL Q  +V
Sbjct: 191 EEFNKLKQKNSV 202


>ref|XP_002511376.1| conserved hypothetical protein [Ricinus communis]
           gi|223550491|gb|EEF51978.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 166

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/72 (37%), Positives = 44/72 (61%)
 Frame = -2

Query: 218 IYHVDECQKVNIASLYFEGKADSWFLDYQEGKNLITWEELIVELYERFGDVTRDNYVGEF 39
           ++ + E  K+++ SLY   KAD WF  +Q      +W + + EL +RFG++T ++ V EF
Sbjct: 76  LFSIPEDHKIDLTSLYLGEKADIWFQGWQAQHPKSSWIDFLEELCKRFGELTVEDVVEEF 135

Query: 38  NKLSQTATVTEY 3
           NK+ Q  T+ EY
Sbjct: 136 NKIKQKETLIEY 147


>ref|XP_002337260.1| predicted protein [Populus trichocarpa] gi|222838644|gb|EEE77009.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
 Frame = -2

Query: 227 FFQIYHVDECQKVNIASLYFEGKADSWFLDYQEGKNL-ITWEELIVELYERFGDVTRDNY 51
           FF++      Q V IASLY EGKA+ WF  Y  G ++ + WEE    +  RFG  +RD+ 
Sbjct: 126 FFKLNATPWQQWVEIASLYLEGKAEIWFEGYMCGLDVSLEWEEFSKAICSRFG--SRDDI 183

Query: 50  VGEFNKLSQTATVTEY 3
           V EFNKL+Q   + EY
Sbjct: 184 VEEFNKLTQEGGMEEY 199


>ref|XP_002333429.1| predicted protein [Populus trichocarpa] gi|222836623|gb|EEE75016.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
 Frame = -2

Query: 227 FFQIYHVDECQKVNIASLYFEGKADSWFLDYQEGK-NLITWEELIVELYERFGDVTRDNY 51
           +F+I+ +   Q + + S Y EGKAD WF     G  +LI WEE   +L  RFG  ++D+ 
Sbjct: 38  YFRIHSIPAHQWIEVVSYYLEGKADVWFEGLVRGSDSLIEWEEFSQDLCRRFG--SKDDI 95

Query: 50  VGEFNKLSQTATVTEY 3
           V EFNKL Q   + +Y
Sbjct: 96  VEEFNKLIQDENMDDY 111


>ref|XP_002332257.1| predicted protein [Populus trichocarpa] gi|222832022|gb|EEE70499.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
 Frame = -2

Query: 227 FFQIYHVDECQKVNIASLYFEGKADSWFLDYQEGK-NLITWEELIVELYERFGDVTRDNY 51
           +F+I+ +   Q + + S Y EGKAD WF     G  +LI WEE   +L  RFG  ++D+ 
Sbjct: 38  YFRIHSIPAHQWIEVVSYYLEGKADVWFEGLVRGSDSLIEWEEFSQDLCRRFG--SKDDI 95

Query: 50  VGEFNKLSQTATVTEY 3
           V EFNKL Q   + +Y
Sbjct: 96  VEEFNKLIQDENMDDY 111


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