BLASTX nr result

ID: Coptis24_contig00039759 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039759
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301998.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
ref|XP_004172524.1| PREDICTED: probable LRR receptor-like serine...   125   5e-27
ref|XP_004135032.1| PREDICTED: probable LRR receptor-like serine...   125   5e-27
ref|XP_002310296.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-27
ref|XP_002889035.1| leucine-rich repeat family protein [Arabidop...   124   1e-26

>ref|XP_002301998.1| predicted protein [Populus trichocarpa] gi|222843724|gb|EEE81271.1|
           predicted protein [Populus trichocarpa]
          Length = 1124

 Score =  125 bits (314), Expect = 4e-27
 Identities = 60/93 (64%), Positives = 77/93 (82%)
 Frame = +3

Query: 3   GTISANVPSSLRYLDLSSNAFTGDIPSNFSGATSSRVELINLAFNKFTGQVPPSFGQLQQ 182
           G IS  + +SLRYLD+SSN+ +G+IP NFS  + S+++LINL++NKF+G+VP S GQLQ+
Sbjct: 156 GKISGYISNSLRYLDISSNSLSGEIPGNFS--SKSQLQLINLSYNKFSGEVPASIGQLQE 213

Query: 183 LEYLWLDWNMLQGTLPSALANCSSLIHFSIQGN 281
           LEYLWLD N L GTLPSA+ANCSSLIH SI+ N
Sbjct: 214 LEYLWLDSNQLYGTLPSAIANCSSLIHLSIEDN 246



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/84 (38%), Positives = 47/84 (55%)
 Frame = +3

Query: 30  SLRYLDLSSNAFTGDIPSNFSGATSSRVELINLAFNKFTGQVPPSFGQLQQLEYLWLDWN 209
           SL+ + L  N  +G +P  FS   S  ++ +NL  N FTG+VP ++G L  L  L L  N
Sbjct: 528 SLQVVSLEENKLSGAVPEGFSSLVS--LQYLNLTSNSFTGEVPENYGFLTSLAVLSLSRN 585

Query: 210 MLQGTLPSALANCSSLIHFSIQGN 281
            + G +P+ L NCSSL    ++ N
Sbjct: 586 YISGMIPAELGNCSSLEVLEMRSN 609



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 22/106 (20%)
 Frame = +3

Query: 30  SLRYLDLSSNAFTGDIPSNFSGATS----------------------SRVELINLAFNKF 143
           SL+YL+L+SN+FTG++P N+   TS                      S +E++ +  N  
Sbjct: 552 SLQYLNLTSNSFTGEVPENYGFLTSLAVLSLSRNYISGMIPAELGNCSSLEVLEMRSNHL 611

Query: 144 TGQVPPSFGQLQQLEYLWLDWNMLQGTLPSALANCSSLIHFSIQGN 281
            G +P    +L +L+ L L  N L G +P  +  CS LI  S+ GN
Sbjct: 612 RGGIPGDISRLSRLKKLDLGENALTGEIPENIYRCSPLISLSLDGN 657



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 32/83 (38%), Positives = 45/83 (54%)
 Frame = +3

Query: 33  LRYLDLSSNAFTGDIPSNFSGATSSRVELINLAFNKFTGQVPPSFGQLQQLEYLWLDWNM 212
           L+ LDL  N F G IP   S     R+ L++L  N F+G +PPSFG L +LE L L+ N 
Sbjct: 385 LQVLDLEGNRFGGRIPMFLSEIR--RLRLLSLGGNLFSGSIPPSFGGLFELETLKLEANN 442

Query: 213 LQGTLPSALANCSSLIHFSIQGN 281
           L G +P  +   ++L    +  N
Sbjct: 443 LSGNVPEEIMRLTNLSTLDLSFN 465


>ref|XP_004172524.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g36180-like, partial [Cucumis sativus]
          Length = 1131

 Score =  125 bits (313), Expect = 5e-27
 Identities = 56/93 (60%), Positives = 80/93 (86%)
 Frame = +3

Query: 3   GTISANVPSSLRYLDLSSNAFTGDIPSNFSGATSSRVELINLAFNKFTGQVPPSFGQLQQ 182
           G IS+++PSSL+YLDLSSNAF+G IP +    T  +++++NL+FN+F G++P SFG+LQ+
Sbjct: 155 GVISSDLPSSLKYLDLSSNAFSGQIPRSVVNMT--QLQVVNLSFNRFGGEIPASFGELQE 212

Query: 183 LEYLWLDWNMLQGTLPSALANCSSLIHFSIQGN 281
           L++LWLD N+L+GTLPSALANCSSL+H S++GN
Sbjct: 213 LQHLWLDHNVLEGTLPSALANCSSLVHLSVEGN 245



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/84 (35%), Positives = 48/84 (57%)
 Frame = +3

Query: 30  SLRYLDLSSNAFTGDIPSNFSGATSSRVELINLAFNKFTGQVPPSFGQLQQLEYLWLDWN 209
           +L+ + L  N  +G++P  FS     R   +NL+ N+F+GQ+P ++G L+ L  L L  N
Sbjct: 530 NLQVIALQENKLSGNVPEGFSSLVGLRY--LNLSSNRFSGQIPSNYGFLRSLVSLSLSDN 587

Query: 210 MLQGTLPSALANCSSLIHFSIQGN 281
            + G +PS L NCS L    ++ N
Sbjct: 588 HISGLVPSDLGNCSDLETLEVRSN 611



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/85 (31%), Positives = 46/85 (54%)
 Frame = +3

Query: 27  SSLRYLDLSSNAFTGDIPSNFSGATSSRVELINLAFNKFTGQVPPSFGQLQQLEYLWLDW 206
           S+L+ LD+  N   G+ P   +G   S + +++ + N F+GQ+P   G L  L+ L +  
Sbjct: 313 SALQVLDIQHNQIRGEFPLWLTGV--STLSVLDFSVNHFSGQIPSGIGNLSGLQELRMSN 370

Query: 207 NMLQGTLPSALANCSSLIHFSIQGN 281
           N  QG +P  + NC+S+     +GN
Sbjct: 371 NSFQGEIPLEIKNCASISVIDFEGN 395


>ref|XP_004135032.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g36180-like [Cucumis sativus]
          Length = 1131

 Score =  125 bits (313), Expect = 5e-27
 Identities = 56/93 (60%), Positives = 80/93 (86%)
 Frame = +3

Query: 3   GTISANVPSSLRYLDLSSNAFTGDIPSNFSGATSSRVELINLAFNKFTGQVPPSFGQLQQ 182
           G IS+++PSSL+YLDLSSNAF+G IP +    T  +++++NL+FN+F G++P SFG+LQ+
Sbjct: 155 GVISSDLPSSLKYLDLSSNAFSGQIPRSVVNMT--QLQVVNLSFNRFGGEIPASFGELQE 212

Query: 183 LEYLWLDWNMLQGTLPSALANCSSLIHFSIQGN 281
           L++LWLD N+L+GTLPSALANCSSL+H S++GN
Sbjct: 213 LQHLWLDHNVLEGTLPSALANCSSLVHLSVEGN 245



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/84 (35%), Positives = 48/84 (57%)
 Frame = +3

Query: 30  SLRYLDLSSNAFTGDIPSNFSGATSSRVELINLAFNKFTGQVPPSFGQLQQLEYLWLDWN 209
           +L+ + L  N  +G++P  FS     R   +NL+ N+F+GQ+P ++G L+ L  L L  N
Sbjct: 530 NLQVIALQENKLSGNVPEGFSSLVGLRY--LNLSSNRFSGQIPSNYGFLRSLVSLSLSDN 587

Query: 210 MLQGTLPSALANCSSLIHFSIQGN 281
            + G +PS L NCS L    ++ N
Sbjct: 588 HISGLVPSDLGNCSDLETLEVRSN 611


>ref|XP_002310296.1| predicted protein [Populus trichocarpa] gi|222853199|gb|EEE90746.1|
           predicted protein [Populus trichocarpa]
          Length = 1126

 Score =  125 bits (313), Expect = 5e-27
 Identities = 58/93 (62%), Positives = 77/93 (82%)
 Frame = +3

Query: 3   GTISANVPSSLRYLDLSSNAFTGDIPSNFSGATSSRVELINLAFNKFTGQVPPSFGQLQQ 182
           G I  ++P SL+YLDLSSN F+G IPS+ S    ++++LINL++N+F+G +P SFGQLQ 
Sbjct: 150 GEIPRSLPVSLKYLDLSSNTFSGSIPSSVSDL--AQLQLINLSYNQFSGSIPASFGQLQS 207

Query: 183 LEYLWLDWNMLQGTLPSALANCSSLIHFSIQGN 281
           LEYLWLD+N+L+GTLPSA+ANCSSL+HFS  GN
Sbjct: 208 LEYLWLDYNILEGTLPSAIANCSSLVHFSANGN 240



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/85 (43%), Positives = 51/85 (60%)
 Frame = +3

Query: 27  SSLRYLDLSSNAFTGDIPSNFSGATSSRVELINLAFNKFTGQVPPSFGQLQQLEYLWLDW 206
           S+L  LDLS N F+G+IP+       +RV L+NL+ N F+G++P SFG L +L  L L  
Sbjct: 452 SNLTTLDLSGNGFSGEIPATIGNL--NRVMLLNLSGNGFSGRIPSSFGNLLRLSSLDLSR 509

Query: 207 NMLQGTLPSALANCSSLIHFSIQGN 281
             L G LPS LA   +L   ++Q N
Sbjct: 510 QSLSGELPSELAGLPNLQVIALQEN 534



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
 Frame = +3

Query: 6   TISANVPS------SLRYLDLSSNAFTGDIPSNFSGATSSRVELINLAFNKFTGQVPPSF 167
           ++S  +PS      +L+ + L  N  +GD+   FS     R   +NL+ N F+GQ+P +F
Sbjct: 511 SLSGELPSELAGLPNLQVIALQENMLSGDVHEGFSSLLGLRY--LNLSSNGFSGQIPLTF 568

Query: 168 GQLQQLEYLWLDWNMLQGTLPSALANCSSLIHFSIQGN 281
           G L+ L  L L  N + G +P  L NCS L    ++ N
Sbjct: 569 GFLKSLVVLSLSKNHISGLIPPELGNCSDLETLELESN 606


>ref|XP_002889035.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297334876|gb|EFH65294.1| leucine-rich repeat
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1141

 Score =  124 bits (310), Expect = 1e-26
 Identities = 62/94 (65%), Positives = 76/94 (80%), Gaps = 1/94 (1%)
 Frame = +3

Query: 3   GTIS-ANVPSSLRYLDLSSNAFTGDIPSNFSGATSSRVELINLAFNKFTGQVPPSFGQLQ 179
           G IS   V  SLRY+DLSSNA + +IP+NFS  +S  ++LINL+FN+F+G++P + GQLQ
Sbjct: 154 GNISDVTVSKSLRYVDLSSNALSSEIPANFSADSS--LQLINLSFNRFSGEIPATLGQLQ 211

Query: 180 QLEYLWLDWNMLQGTLPSALANCSSLIHFSIQGN 281
            LEYLWLD N LQGTLPSALANCSSLIHFS+ GN
Sbjct: 212 DLEYLWLDSNQLQGTLPSALANCSSLIHFSVTGN 245



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/85 (41%), Positives = 48/85 (56%)
 Frame = +3

Query: 27  SSLRYLDLSSNAFTGDIPSNFSGATSSRVELINLAFNKFTGQVPPSFGQLQQLEYLWLDW 206
           S LR LDL  N+FTG IP   S    S +E + L  N  +G++P SF +L  L  L L  
Sbjct: 627 SRLRKLDLGHNSFTGSIPDQIS--KDSSLESLLLNSNSLSGRIPESFSRLTNLTSLDLSS 684

Query: 207 NMLQGTLPSALANCSSLIHFSIQGN 281
           N L  T+PS+L+   SL +F++  N
Sbjct: 685 NRLNSTIPSSLSRLHSLNYFNLSRN 709



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/76 (39%), Positives = 47/76 (61%)
 Frame = +3

Query: 30  SLRYLDLSSNAFTGDIPSNFSGATSSRVELINLAFNKFTGQVPPSFGQLQQLEYLWLDWN 209
           SLR+L+LSSN F+G IP N+    S  +++++L+ N+ +G +PP  G    LE L L  N
Sbjct: 556 SLRFLNLSSNLFSGHIPKNYGFLKS--LQVLSLSHNRISGSIPPEIGNCTSLEVLELSSN 613

Query: 210 MLQGTLPSALANCSSL 257
            L+G +P  ++  S L
Sbjct: 614 RLKGHIPVYVSKLSRL 629



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/83 (34%), Positives = 47/83 (56%)
 Frame = +3

Query: 33  LRYLDLSSNAFTGDIPSNFSGATSSRVELINLAFNKFTGQVPPSFGQLQQLEYLWLDWNM 212
           L+ + L +NA  G +P  FS   S R   +NL+ N F+G +P ++G L+ L+ L L  N 
Sbjct: 533 LQVVALGNNALDGVVPEGFSSLVSLR--FLNLSSNLFSGHIPKNYGFLKSLQVLSLSHNR 590

Query: 213 LQGTLPSALANCSSLIHFSIQGN 281
           + G++P  + NC+SL    +  N
Sbjct: 591 ISGSIPPEIGNCTSLEVLELSSN 613


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