BLASTX nr result

ID: Coptis24_contig00039749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039749
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279978.1| PREDICTED: uncharacterized amino-acid permea...   255   3e-66
ref|XP_003555258.1| PREDICTED: uncharacterized amino-acid permea...   219   2e-55
ref|XP_004167449.1| PREDICTED: amino-acid permease BAT1-like [Cu...   218   6e-55
ref|XP_002876734.1| hypothetical protein ARALYDRAFT_484023 [Arab...   217   1e-54
ref|NP_001043529.2| Os01g0607200 [Oryza sativa Japonica Group] g...   217   1e-54

>ref|XP_002279978.1| PREDICTED: uncharacterized amino-acid permease C15C4.04c-like
           [Vitis vinifera]
          Length = 526

 Score =  255 bits (652), Expect = 3e-66
 Identities = 123/155 (79%), Positives = 135/155 (87%), Gaps = 4/155 (2%)
 Frame = -3

Query: 454 MENGIKVLEDEASYIPLQDD----EDDSRLKQLGYKPELSRSLSAISNFAVTFSIISVLT 287
           ME+GI++ ED   Y PL D      DDSRLKQLGY+ ELSRSLS+I NFAVTF+IISVLT
Sbjct: 1   MEDGIRISEDAGLYRPLTDGYTNASDDSRLKQLGYRQELSRSLSSIGNFAVTFTIISVLT 60

Query: 286 GLTTTFNTGIEFGGPLTMVYGWLIAGFFTLIVGLAMAEICSSYPTSGGLYFWSAKLCGNE 107
           GLTTTFNTG+ +GGPLTMVYGW I G  TL+VGLAMAEICS+YPTSGGLYFWSAKLCGNE
Sbjct: 61  GLTTTFNTGLTYGGPLTMVYGWPIVGMLTLVVGLAMAEICSAYPTSGGLYFWSAKLCGNE 120

Query: 106 WAPFASWLTGWFNIVGQWAVTTSIDFSLAQLLQVI 2
           W PFASWLTGWFNIVGQWAVTTSIDFSLAQ++QVI
Sbjct: 121 WGPFASWLTGWFNIVGQWAVTTSIDFSLAQMIQVI 155


>ref|XP_003555258.1| PREDICTED: uncharacterized amino-acid permease C15C4.04c-like
           [Glycine max]
          Length = 519

 Score =  219 bits (559), Expect = 2e-55
 Identities = 102/146 (69%), Positives = 122/146 (83%)
 Frame = -3

Query: 439 KVLEDEASYIPLQDDEDDSRLKQLGYKPELSRSLSAISNFAVTFSIISVLTGLTTTFNTG 260
           K +  +  Y+PL  D   +RL+QLGYK EL+R LS ISNFA +FSIISVLTG+TT +NTG
Sbjct: 7   KTVSSDVGYVPL--DSGHARLRQLGYKQELNRHLSVISNFAFSFSIISVLTGVTTLYNTG 64

Query: 259 IEFGGPLTMVYGWLIAGFFTLIVGLAMAEICSSYPTSGGLYFWSAKLCGNEWAPFASWLT 80
           + +GGP++ VYGW IA  FT+IV L+MAEICSSYPTSGGLY+WSAKL G  WAPFASW+T
Sbjct: 65  LNYGGPVSFVYGWFIASGFTMIVALSMAEICSSYPTSGGLYYWSAKLAGPRWAPFASWIT 124

Query: 79  GWFNIVGQWAVTTSIDFSLAQLLQVI 2
           GWFNIVGQWAVTTS+D+SLAQL+QVI
Sbjct: 125 GWFNIVGQWAVTTSVDYSLAQLIQVI 150


>ref|XP_004167449.1| PREDICTED: amino-acid permease BAT1-like [Cucumis sativus]
          Length = 513

 Score =  218 bits (554), Expect = 6e-55
 Identities = 98/132 (74%), Positives = 115/132 (87%)
 Frame = -3

Query: 397 DEDDSRLKQLGYKPELSRSLSAISNFAVTFSIISVLTGLTTTFNTGIEFGGPLTMVYGWL 218
           D   +RL +LGYK EL R LS +SNFA +FSIISVLTG+TT +N G+ FGGP+++VYGW 
Sbjct: 11  DTGHARLNELGYKQELKRDLSVVSNFAFSFSIISVLTGITTLYNNGLNFGGPVSLVYGWF 70

Query: 217 IAGFFTLIVGLAMAEICSSYPTSGGLYFWSAKLCGNEWAPFASWLTGWFNIVGQWAVTTS 38
           IAGFFT+ VGL+MAEICSSYPTSGGLY+WSAKL G  WAPFASW+TGWFNIVGQWAVTTS
Sbjct: 71  IAGFFTMFVGLSMAEICSSYPTSGGLYYWSAKLAGPNWAPFASWMTGWFNIVGQWAVTTS 130

Query: 37  IDFSLAQLLQVI 2
           +D+SLAQL+QVI
Sbjct: 131 VDYSLAQLIQVI 142


>ref|XP_002876734.1| hypothetical protein ARALYDRAFT_484023 [Arabidopsis lyrata subsp.
           lyrata] gi|297322572|gb|EFH52993.1| hypothetical protein
           ARALYDRAFT_484023 [Arabidopsis lyrata subsp. lyrata]
          Length = 515

 Score =  217 bits (552), Expect = 1e-54
 Identities = 100/142 (70%), Positives = 118/142 (83%)
 Frame = -3

Query: 427 DEASYIPLQDDEDDSRLKQLGYKPELSRSLSAISNFAVTFSIISVLTGLTTTFNTGIEFG 248
           D++ Y+P  D     RLK+LGYK EL R LS  SNFA++FSIISVLTG+TTT+NTG+ FG
Sbjct: 4   DQSFYVPAMDS-GQVRLKELGYKQELKRDLSVFSNFAISFSIISVLTGITTTYNTGLRFG 62

Query: 247 GPLTMVYGWLIAGFFTLIVGLAMAEICSSYPTSGGLYFWSAKLCGNEWAPFASWLTGWFN 68
           G +T+VYGW +AG FT+ VGL+MAEICSSYPTSGGLY+WSA L G  WAP ASW+TGWFN
Sbjct: 63  GTVTLVYGWFLAGSFTMCVGLSMAEICSSYPTSGGLYYWSAMLAGPRWAPLASWMTGWFN 122

Query: 67  IVGQWAVTTSIDFSLAQLLQVI 2
           IVGQWAVT S+DFSLAQL+QVI
Sbjct: 123 IVGQWAVTASVDFSLAQLIQVI 144


>ref|NP_001043529.2| Os01g0607200 [Oryza sativa Japonica Group]
           gi|255673448|dbj|BAF05443.2| Os01g0607200 [Oryza sativa
           Japonica Group]
          Length = 532

 Score =  217 bits (552), Expect = 1e-54
 Identities = 100/133 (75%), Positives = 118/133 (88%), Gaps = 1/133 (0%)
 Frame = -3

Query: 397 DEDDSRLKQLGYKPELSRSLSAISNFAVTFSIISVLTGLTTTFNTGIEFGGPLTMVYGWL 218
           D D+ +L+ LGY+P+L R+LS +SNFAV+FSI+SVLTG+TT F TG++FGGP TMVYGW 
Sbjct: 29  DYDERKLRLLGYEPQLKRNLSLLSNFAVSFSIVSVLTGITTLFGTGLQFGGPATMVYGWP 88

Query: 217 IAGFFTLIVGLAMAEICSSYPTSGGLYFWSAKLCGN-EWAPFASWLTGWFNIVGQWAVTT 41
           IAG  TL+VGLAMAEICS+YPTSGGLYFWSA+LC +  W PFASWLTGWFNIVGQWAVTT
Sbjct: 89  IAGAMTLVVGLAMAEICSAYPTSGGLYFWSARLCSHRRWGPFASWLTGWFNIVGQWAVTT 148

Query: 40  SIDFSLAQLLQVI 2
           S+DFSLAQL+QVI
Sbjct: 149 SVDFSLAQLIQVI 161


Top