BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039746
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   149   3e-34
emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]   149   3e-34
emb|CAN69372.1| hypothetical protein VITISV_008198 [Vitis vinifera]   142   4e-32
emb|CAN68706.1| hypothetical protein VITISV_001642 [Vitis vinifera]   139   2e-31
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   137   1e-30

>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  149 bits (375), Expect = 3e-34
 Identities = 69/115 (60%), Positives = 86/115 (74%), Gaps = 3/115 (2%)
 Frame = +2

Query: 11   RLCIPDCSLRFKIIKELYGEG---HFGRDKTFLLLSNSYFWPTMRHEVAKYVERCHVCQV 181
            RLC+P  SLR  +I EL+G G   HFGRDKT  L+ + +FWP+++ +V K +++C  CQV
Sbjct: 1090 RLCLPRTSLRDHVIWELHGGGMGGHFGRDKTIALVEDRFFWPSLKKDVWKVIKQCRACQV 1149

Query: 182  SKGKATNAGLYMPLPVPTQPWTDLSMDFIVGLACTQRGMDSILVVVDRFSKMAHF 346
             KG   N GLY PLPVP++PW DLSMDF++GL  TQRG DSI VVVDRFSKMAHF
Sbjct: 1150 GKGSKQNTGLYTPLPVPSKPWEDLSMDFVLGLPRTQRGFDSIFVVVDRFSKMAHF 1204


>emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]
          Length = 1392

 Score =  149 bits (375), Expect = 3e-34
 Identities = 69/115 (60%), Positives = 86/115 (74%), Gaps = 3/115 (2%)
 Frame = +2

Query: 11   RLCIPDCSLRFKIIKELYGEG---HFGRDKTFLLLSNSYFWPTMRHEVAKYVERCHVCQV 181
            RLC+P  SLR  +I EL+G G   HFGRDKT  L+ + +FWP+++ +V K +++C  CQV
Sbjct: 961  RLCLPRTSLRDHVIWELHGGGMGGHFGRDKTIALVEDRFFWPSLKKDVWKVIKQCRACQV 1020

Query: 182  SKGKATNAGLYMPLPVPTQPWTDLSMDFIVGLACTQRGMDSILVVVDRFSKMAHF 346
             KG   N GLY PLPVP++PW DLSMDF++GL  TQRG DSI VVVDRFSKMAHF
Sbjct: 1021 GKGSKQNTGLYTPLPVPSKPWEDLSMDFVLGLPRTQRGFDSIFVVVDRFSKMAHF 1075


>emb|CAN69372.1| hypothetical protein VITISV_008198 [Vitis vinifera]
          Length = 766

 Score =  142 bits (357), Expect = 4e-32
 Identities = 65/115 (56%), Positives = 84/115 (73%), Gaps = 3/115 (2%)
 Frame = +2

Query: 11  RLCIPDCSLRFKIIKELYGEG---HFGRDKTFLLLSNSYFWPTMRHEVAKYVERCHVCQV 181
           RLC+P  SLR  +I EL+G G   HFGRDKT  L+ + +FW +++ +V K +++C  CQV
Sbjct: 631 RLCLPRTSLRDHVIWELHGGGMGGHFGRDKTIALVEDCFFWLSLKKDVWKVIKQCQTCQV 690

Query: 182 SKGKATNAGLYMPLPVPTQPWTDLSMDFIVGLACTQRGMDSILVVVDRFSKMAHF 346
            KG   N GLY PLP+P++PW DLSMDF++GL  TQRG DSI VVVD+FSKM HF
Sbjct: 691 GKGSKQNTGLYTPLPIPSKPWEDLSMDFVLGLPRTQRGFDSIFVVVDKFSKMTHF 745


>emb|CAN68706.1| hypothetical protein VITISV_001642 [Vitis vinifera]
          Length = 1082

 Score =  139 bits (350), Expect = 2e-31
 Identities = 64/115 (55%), Positives = 83/115 (72%), Gaps = 3/115 (2%)
 Frame = +2

Query: 11   RLCIPDCSLRFKIIKELYGEG---HFGRDKTFLLLSNSYFWPTMRHEVAKYVERCHVCQV 181
            RLC+P  SLR  +I EL+G G   HFGRDKT  L+ + +FWP+++ +V K +++C  CQV
Sbjct: 771  RLCLPRTSLRDHVIWELHGGGMGGHFGRDKTIALVGDHFFWPSLKKDVWKVIKQCRACQV 830

Query: 182  SKGKATNAGLYMPLPVPTQPWTDLSMDFIVGLACTQRGMDSILVVVDRFSKMAHF 346
             KG   N GLY  LP+P++PW DLSMDF++GL  TQ+G  SI VVVDRFSKM HF
Sbjct: 831  GKGSKQNIGLYTSLPIPSKPWEDLSMDFVLGLPRTQQGFHSIFVVVDRFSKMTHF 885


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  137 bits (344), Expect = 1e-30
 Identities = 64/115 (55%), Positives = 83/115 (72%), Gaps = 3/115 (2%)
 Frame = +2

Query: 11   RLCIPDCSLRFKIIKELYGEG---HFGRDKTFLLLSNSYFWPTMRHEVAKYVERCHVCQV 181
            +LCIP  S+R  +++E +G G   HFG  KT  +L++ +FWP MR +V ++V RC  CQ 
Sbjct: 1184 KLCIPASSVRLLLLQEAHGGGLMGHFGAKKTHDILASHFFWPQMRRDVGRFVARCATCQK 1243

Query: 182  SKGKATNAGLYMPLPVPTQPWTDLSMDFIVGLACTQRGMDSILVVVDRFSKMAHF 346
            +K +    GLYMPLPVPT PW D+SMDF++GL  T+RG DSI VVVDRFSKMAHF
Sbjct: 1244 AKSRLHPHGLYMPLPVPTVPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHF 1298



 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 51/117 (43%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
 Frame = +2

Query: 11   RLCIPDC-SLRFKIIKELYGEG---HFGRDKTFLLLSNSYFWPTMRHEVAKYVERCHVCQ 178
            R+C+PD   L+  I++E +      H G  K +L L   Y+W +M+ E+A++V  C VCQ
Sbjct: 2004 RVCVPDVRELKQLILQEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQ 2063

Query: 179  VSKGKATN-AGLYMPLPVPTQPWTDLSMDFIVGLACTQRGMDSILVVVDRFSKMAHF 346
              K +    AGL  PL VP   W ++ MDFI GL  TQ G DSI VVVDR +K+A F
Sbjct: 2064 RVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARF 2120