BLASTX nr result
ID: Coptis24_contig00039735
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00039735 (340 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265878.1| PREDICTED: histone H2AX [Vitis vinifera] gi|... 100 2e-19 ref|XP_002328535.1| histone 2 [Populus trichocarpa] gi|222838250... 100 2e-19 ref|XP_003626340.1| Histone H2A [Medicago truncatula] gi|3575121... 100 2e-19 ref|XP_002319038.1| histone 2 [Populus trichocarpa] gi|222857414... 99 3e-19 ref|XP_002271469.1| PREDICTED: histone H2AX [Vitis vinifera] gi|... 99 5e-19 >ref|XP_002265878.1| PREDICTED: histone H2AX [Vitis vinifera] gi|147815277|emb|CAN70026.1| hypothetical protein VITISV_030174 [Vitis vinifera] Length = 139 Score = 100 bits (248), Expect = 2e-19 Identities = 49/57 (85%), Positives = 54/57 (94%) Frame = +3 Query: 3 IIPRHIQLAVRNDEELSKLLGTVTIAHGGVLPNINPILLPKKTGKGKDDIGSASQEF 173 I+PRHIQLAVRNDEELSKLLG+VTIA+GGVLPNI+ LLPKKTGKGK +IGSASQEF Sbjct: 83 IVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKTGKGKGEIGSASQEF 139 >ref|XP_002328535.1| histone 2 [Populus trichocarpa] gi|222838250|gb|EEE76615.1| histone 2 [Populus trichocarpa] Length = 142 Score = 99.8 bits (247), Expect = 2e-19 Identities = 49/57 (85%), Positives = 53/57 (92%) Frame = +3 Query: 3 IIPRHIQLAVRNDEELSKLLGTVTIAHGGVLPNINPILLPKKTGKGKDDIGSASQEF 173 I+PRHIQLAVRNDEELSKLLG+VTIA+GGVLPNI+ LLPKK GKGK DIGSASQEF Sbjct: 86 IVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQEF 142 >ref|XP_003626340.1| Histone H2A [Medicago truncatula] gi|357512107|ref|XP_003626342.1| Histone H2A [Medicago truncatula] gi|124360158|gb|ABN08174.1| Histone H2A; Histone-fold [Medicago truncatula] gi|124360160|gb|ABN08176.1| Histone H2A; Histone-fold [Medicago truncatula] gi|355501355|gb|AES82558.1| Histone H2A [Medicago truncatula] gi|355501357|gb|AES82560.1| Histone H2A [Medicago truncatula] gi|388498640|gb|AFK37386.1| unknown [Medicago truncatula] Length = 139 Score = 99.8 bits (247), Expect = 2e-19 Identities = 49/57 (85%), Positives = 53/57 (92%) Frame = +3 Query: 3 IIPRHIQLAVRNDEELSKLLGTVTIAHGGVLPNINPILLPKKTGKGKDDIGSASQEF 173 I+PRHIQLAVRNDEELSKLLGTVTIA+GGVLPNI+ LLPKK GKGK +IGSASQEF Sbjct: 83 IVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQTLLPKKVGKGKGEIGSASQEF 139 >ref|XP_002319038.1| histone 2 [Populus trichocarpa] gi|222857414|gb|EEE94961.1| histone 2 [Populus trichocarpa] Length = 142 Score = 99.4 bits (246), Expect = 3e-19 Identities = 49/57 (85%), Positives = 53/57 (92%) Frame = +3 Query: 3 IIPRHIQLAVRNDEELSKLLGTVTIAHGGVLPNINPILLPKKTGKGKDDIGSASQEF 173 I+PRHIQLAVRNDEELSKLLG+VTIA+GGVLPNI+ LLPKK GKGK DIGSASQEF Sbjct: 86 IVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQEF 142 >ref|XP_002271469.1| PREDICTED: histone H2AX [Vitis vinifera] gi|147855438|emb|CAN79609.1| hypothetical protein VITISV_009852 [Vitis vinifera] gi|296086658|emb|CBI32293.3| unnamed protein product [Vitis vinifera] Length = 137 Score = 98.6 bits (244), Expect = 5e-19 Identities = 49/57 (85%), Positives = 53/57 (92%) Frame = +3 Query: 3 IIPRHIQLAVRNDEELSKLLGTVTIAHGGVLPNINPILLPKKTGKGKDDIGSASQEF 173 I+PRHIQLAVRNDEELSKLLGTVTIA+GGVLPNI+ LLPKKTG GK +IGSASQEF Sbjct: 81 IVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKTGAGKGEIGSASQEF 137