BLASTX nr result

ID: Coptis24_contig00039735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039735
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265878.1| PREDICTED: histone H2AX [Vitis vinifera] gi|...   100   2e-19
ref|XP_002328535.1| histone 2 [Populus trichocarpa] gi|222838250...   100   2e-19
ref|XP_003626340.1| Histone H2A [Medicago truncatula] gi|3575121...   100   2e-19
ref|XP_002319038.1| histone 2 [Populus trichocarpa] gi|222857414...    99   3e-19
ref|XP_002271469.1| PREDICTED: histone H2AX [Vitis vinifera] gi|...    99   5e-19

>ref|XP_002265878.1| PREDICTED: histone H2AX [Vitis vinifera]
           gi|147815277|emb|CAN70026.1| hypothetical protein
           VITISV_030174 [Vitis vinifera]
          Length = 139

 Score =  100 bits (248), Expect = 2e-19
 Identities = 49/57 (85%), Positives = 54/57 (94%)
 Frame = +3

Query: 3   IIPRHIQLAVRNDEELSKLLGTVTIAHGGVLPNINPILLPKKTGKGKDDIGSASQEF 173
           I+PRHIQLAVRNDEELSKLLG+VTIA+GGVLPNI+  LLPKKTGKGK +IGSASQEF
Sbjct: 83  IVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKTGKGKGEIGSASQEF 139


>ref|XP_002328535.1| histone 2 [Populus trichocarpa] gi|222838250|gb|EEE76615.1| histone
           2 [Populus trichocarpa]
          Length = 142

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 49/57 (85%), Positives = 53/57 (92%)
 Frame = +3

Query: 3   IIPRHIQLAVRNDEELSKLLGTVTIAHGGVLPNINPILLPKKTGKGKDDIGSASQEF 173
           I+PRHIQLAVRNDEELSKLLG+VTIA+GGVLPNI+  LLPKK GKGK DIGSASQEF
Sbjct: 86  IVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQEF 142


>ref|XP_003626340.1| Histone H2A [Medicago truncatula] gi|357512107|ref|XP_003626342.1|
           Histone H2A [Medicago truncatula]
           gi|124360158|gb|ABN08174.1| Histone H2A; Histone-fold
           [Medicago truncatula] gi|124360160|gb|ABN08176.1|
           Histone H2A; Histone-fold [Medicago truncatula]
           gi|355501355|gb|AES82558.1| Histone H2A [Medicago
           truncatula] gi|355501357|gb|AES82560.1| Histone H2A
           [Medicago truncatula] gi|388498640|gb|AFK37386.1|
           unknown [Medicago truncatula]
          Length = 139

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 49/57 (85%), Positives = 53/57 (92%)
 Frame = +3

Query: 3   IIPRHIQLAVRNDEELSKLLGTVTIAHGGVLPNINPILLPKKTGKGKDDIGSASQEF 173
           I+PRHIQLAVRNDEELSKLLGTVTIA+GGVLPNI+  LLPKK GKGK +IGSASQEF
Sbjct: 83  IVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQTLLPKKVGKGKGEIGSASQEF 139


>ref|XP_002319038.1| histone 2 [Populus trichocarpa] gi|222857414|gb|EEE94961.1| histone
           2 [Populus trichocarpa]
          Length = 142

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/57 (85%), Positives = 53/57 (92%)
 Frame = +3

Query: 3   IIPRHIQLAVRNDEELSKLLGTVTIAHGGVLPNINPILLPKKTGKGKDDIGSASQEF 173
           I+PRHIQLAVRNDEELSKLLG+VTIA+GGVLPNI+  LLPKK GKGK DIGSASQEF
Sbjct: 86  IVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQEF 142


>ref|XP_002271469.1| PREDICTED: histone H2AX [Vitis vinifera]
           gi|147855438|emb|CAN79609.1| hypothetical protein
           VITISV_009852 [Vitis vinifera]
           gi|296086658|emb|CBI32293.3| unnamed protein product
           [Vitis vinifera]
          Length = 137

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 49/57 (85%), Positives = 53/57 (92%)
 Frame = +3

Query: 3   IIPRHIQLAVRNDEELSKLLGTVTIAHGGVLPNINPILLPKKTGKGKDDIGSASQEF 173
           I+PRHIQLAVRNDEELSKLLGTVTIA+GGVLPNI+  LLPKKTG GK +IGSASQEF
Sbjct: 81  IVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKTGAGKGEIGSASQEF 137


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