BLASTX nr result

ID: Coptis24_contig00039727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039727
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24131.3| unnamed protein product [Vitis vinifera]              124   6e-27
ref|XP_002265699.1| PREDICTED: general transcription factor 3C p...   124   6e-27
emb|CAN60433.1| hypothetical protein VITISV_020389 [Vitis vinifera]   113   1e-23
ref|XP_002330644.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_004146849.1| PREDICTED: transcription factor tau subunit ...   100   2e-19

>emb|CBI24131.3| unnamed protein product [Vitis vinifera]
          Length = 915

 Score =  124 bits (312), Expect = 6e-27
 Identities = 56/97 (57%), Positives = 77/97 (79%)
 Frame = +1

Query: 1   PDNVEACIMAAKMYQKCDQVEQSVSVLEHYLKNHATEPDLSVISLLAATHMKNNAHAKAL 180
           P+NVEA    AK+Y+KC QVE+SVS+LE Y+K+H T+ DLS++ +LAA  M+NN H +AL
Sbjct: 226 PENVEAPKTGAKLYKKCGQVERSVSILEDYIKDHPTKADLSIVDMLAAVCMENNVHDRAL 285

Query: 181 QQIERARLVYCSQKQLPIYLTVKAGICQVHLNNFKEA 291
           Q IE A+L+YCS K LP++LT+KAGIC +HL N ++A
Sbjct: 286 QHIEHAQLLYCSGKDLPLHLTIKAGICHIHLGNIEKA 322


>ref|XP_002265699.1| PREDICTED: general transcription factor 3C polypeptide 3-like
           [Vitis vinifera]
          Length = 1110

 Score =  124 bits (312), Expect = 6e-27
 Identities = 56/97 (57%), Positives = 77/97 (79%)
 Frame = +1

Query: 1   PDNVEACIMAAKMYQKCDQVEQSVSVLEHYLKNHATEPDLSVISLLAATHMKNNAHAKAL 180
           P+NVEA    AK+Y+KC QVE+SVS+LE Y+K+H T+ DLS++ +LAA  M+NN H +AL
Sbjct: 266 PENVEAPKTGAKLYKKCGQVERSVSILEDYIKDHPTKADLSIVDMLAAVCMENNVHDRAL 325

Query: 181 QQIERARLVYCSQKQLPIYLTVKAGICQVHLNNFKEA 291
           Q IE A+L+YCS K LP++LT+KAGIC +HL N ++A
Sbjct: 326 QHIEHAQLLYCSGKDLPLHLTIKAGICHIHLGNIEKA 362


>emb|CAN60433.1| hypothetical protein VITISV_020389 [Vitis vinifera]
          Length = 1463

 Score =  113 bits (283), Expect = 1e-23
 Identities = 49/86 (56%), Positives = 70/86 (81%)
 Frame = +1

Query: 34  KMYQKCDQVEQSVSVLEHYLKNHATEPDLSVISLLAATHMKNNAHAKALQQIERARLVYC 213
           ++Y+KC QVE+SVS+LE Y+K+H T+ DLS++ +LAA  M+NN H +ALQ IE A+L+YC
Sbjct: 305 QLYKKCGQVERSVSILEDYIKDHPTKADLSIVDMLAAVCMENNVHDRALQHIEHAQLLYC 364

Query: 214 SQKQLPIYLTVKAGICQVHLNNFKEA 291
           S K LP++LT+KAGIC +HL N ++A
Sbjct: 365 SGKDLPLHLTIKAGICHIHLGNIEKA 390


>ref|XP_002330644.1| predicted protein [Populus trichocarpa] gi|222872248|gb|EEF09379.1|
           predicted protein [Populus trichocarpa]
          Length = 686

 Score =  100 bits (249), Expect = 1e-19
 Identities = 50/97 (51%), Positives = 68/97 (70%)
 Frame = +1

Query: 1   PDNVEACIMAAKMYQKCDQVEQSVSVLEHYLKNHATEPDLSVISLLAATHMKNNAHAKAL 180
           P++VEA   AAKM+  C Q+++ V +LE YLK H +E DLSVI LLA   M+ +AH  AL
Sbjct: 276 PEDVEAIKTAAKMHLNCGQIKRCVGILEDYLKGHPSEADLSVIILLADVFMEIDAHNNAL 335

Query: 181 QQIERARLVYCSQKQLPIYLTVKAGICQVHLNNFKEA 291
           Q IE A+++Y S K+LP+ L +KAGIC V L N ++A
Sbjct: 336 QHIEHAQMIYYSGKELPLELMIKAGICHVFLGNIEKA 372


>ref|XP_004146849.1| PREDICTED: transcription factor tau subunit sfc4-like [Cucumis
           sativus]
          Length = 927

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/95 (47%), Positives = 67/95 (70%)
 Frame = +1

Query: 7   NVEACIMAAKMYQKCDQVEQSVSVLEHYLKNHATEPDLSVISLLAATHMKNNAHAKALQQ 186
           NVEA +  AK+YQKC  +E+++ +LE Y+K H +E DL V+ LLA+ +M +   +KAL++
Sbjct: 292 NVEALMTGAKLYQKCGHLERAICILEDYIKGHPSEADLDVVDLLASLYMGSKEFSKALER 351

Query: 187 IERARLVYCSQKQLPIYLTVKAGICQVHLNNFKEA 291
           IE A  VYC+  +LP+ LT KAGIC  HL + ++A
Sbjct: 352 IEHADRVYCAGNELPLNLTTKAGICHAHLGDLEKA 386


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