BLASTX nr result
ID: Coptis24_contig00039727
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00039727 (292 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI24131.3| unnamed protein product [Vitis vinifera] 124 6e-27 ref|XP_002265699.1| PREDICTED: general transcription factor 3C p... 124 6e-27 emb|CAN60433.1| hypothetical protein VITISV_020389 [Vitis vinifera] 113 1e-23 ref|XP_002330644.1| predicted protein [Populus trichocarpa] gi|2... 100 1e-19 ref|XP_004146849.1| PREDICTED: transcription factor tau subunit ... 100 2e-19 >emb|CBI24131.3| unnamed protein product [Vitis vinifera] Length = 915 Score = 124 bits (312), Expect = 6e-27 Identities = 56/97 (57%), Positives = 77/97 (79%) Frame = +1 Query: 1 PDNVEACIMAAKMYQKCDQVEQSVSVLEHYLKNHATEPDLSVISLLAATHMKNNAHAKAL 180 P+NVEA AK+Y+KC QVE+SVS+LE Y+K+H T+ DLS++ +LAA M+NN H +AL Sbjct: 226 PENVEAPKTGAKLYKKCGQVERSVSILEDYIKDHPTKADLSIVDMLAAVCMENNVHDRAL 285 Query: 181 QQIERARLVYCSQKQLPIYLTVKAGICQVHLNNFKEA 291 Q IE A+L+YCS K LP++LT+KAGIC +HL N ++A Sbjct: 286 QHIEHAQLLYCSGKDLPLHLTIKAGICHIHLGNIEKA 322 >ref|XP_002265699.1| PREDICTED: general transcription factor 3C polypeptide 3-like [Vitis vinifera] Length = 1110 Score = 124 bits (312), Expect = 6e-27 Identities = 56/97 (57%), Positives = 77/97 (79%) Frame = +1 Query: 1 PDNVEACIMAAKMYQKCDQVEQSVSVLEHYLKNHATEPDLSVISLLAATHMKNNAHAKAL 180 P+NVEA AK+Y+KC QVE+SVS+LE Y+K+H T+ DLS++ +LAA M+NN H +AL Sbjct: 266 PENVEAPKTGAKLYKKCGQVERSVSILEDYIKDHPTKADLSIVDMLAAVCMENNVHDRAL 325 Query: 181 QQIERARLVYCSQKQLPIYLTVKAGICQVHLNNFKEA 291 Q IE A+L+YCS K LP++LT+KAGIC +HL N ++A Sbjct: 326 QHIEHAQLLYCSGKDLPLHLTIKAGICHIHLGNIEKA 362 >emb|CAN60433.1| hypothetical protein VITISV_020389 [Vitis vinifera] Length = 1463 Score = 113 bits (283), Expect = 1e-23 Identities = 49/86 (56%), Positives = 70/86 (81%) Frame = +1 Query: 34 KMYQKCDQVEQSVSVLEHYLKNHATEPDLSVISLLAATHMKNNAHAKALQQIERARLVYC 213 ++Y+KC QVE+SVS+LE Y+K+H T+ DLS++ +LAA M+NN H +ALQ IE A+L+YC Sbjct: 305 QLYKKCGQVERSVSILEDYIKDHPTKADLSIVDMLAAVCMENNVHDRALQHIEHAQLLYC 364 Query: 214 SQKQLPIYLTVKAGICQVHLNNFKEA 291 S K LP++LT+KAGIC +HL N ++A Sbjct: 365 SGKDLPLHLTIKAGICHIHLGNIEKA 390 >ref|XP_002330644.1| predicted protein [Populus trichocarpa] gi|222872248|gb|EEF09379.1| predicted protein [Populus trichocarpa] Length = 686 Score = 100 bits (249), Expect = 1e-19 Identities = 50/97 (51%), Positives = 68/97 (70%) Frame = +1 Query: 1 PDNVEACIMAAKMYQKCDQVEQSVSVLEHYLKNHATEPDLSVISLLAATHMKNNAHAKAL 180 P++VEA AAKM+ C Q+++ V +LE YLK H +E DLSVI LLA M+ +AH AL Sbjct: 276 PEDVEAIKTAAKMHLNCGQIKRCVGILEDYLKGHPSEADLSVIILLADVFMEIDAHNNAL 335 Query: 181 QQIERARLVYCSQKQLPIYLTVKAGICQVHLNNFKEA 291 Q IE A+++Y S K+LP+ L +KAGIC V L N ++A Sbjct: 336 QHIEHAQMIYYSGKELPLELMIKAGICHVFLGNIEKA 372 >ref|XP_004146849.1| PREDICTED: transcription factor tau subunit sfc4-like [Cucumis sativus] Length = 927 Score = 100 bits (248), Expect = 2e-19 Identities = 45/95 (47%), Positives = 67/95 (70%) Frame = +1 Query: 7 NVEACIMAAKMYQKCDQVEQSVSVLEHYLKNHATEPDLSVISLLAATHMKNNAHAKALQQ 186 NVEA + AK+YQKC +E+++ +LE Y+K H +E DL V+ LLA+ +M + +KAL++ Sbjct: 292 NVEALMTGAKLYQKCGHLERAICILEDYIKGHPSEADLDVVDLLASLYMGSKEFSKALER 351 Query: 187 IERARLVYCSQKQLPIYLTVKAGICQVHLNNFKEA 291 IE A VYC+ +LP+ LT KAGIC HL + ++A Sbjct: 352 IEHADRVYCAGNELPLNLTTKAGICHAHLGDLEKA 386