BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039701
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   125   4e-27
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   125   4e-27
emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana]         125   4e-27
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   125   4e-27
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   125   4e-27

>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  125 bits (314), Expect = 4e-27
 Identities = 64/117 (54%), Positives = 83/117 (70%), Gaps = 3/117 (2%)
 Frame = +1

Query: 4   ASECR--SNDNVAETANFVEANAEVEHTLLL-TYQGERSNEPGNWYLDTAASNHMTGKKN 174
           ASEC+  SN    E AN+VE   + E  LL+ +Y+ +   E   WYLD+ ASNHM G+K+
Sbjct: 291 ASECKAPSNKKFEEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKS 350

Query: 175 LFVELNELVRGSVTFGNGSKVPVRGKGKIPFRLKNGDQQFISNVYYVPDMKSDILSL 345
           +F EL+E VRG+V  G+ SK+ V+GKG I  RLKNGD QFISNVYY+P MK++ILSL
Sbjct: 351 MFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSL 407


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
           gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
           polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  125 bits (314), Expect = 4e-27
 Identities = 64/117 (54%), Positives = 83/117 (70%), Gaps = 3/117 (2%)
 Frame = +1

Query: 4   ASECR--SNDNVAETANFVEANAEVEHTLLL-TYQGERSNEPGNWYLDTAASNHMTGKKN 174
           ASEC+  SN    E AN+VE   + E  LL+ +Y+ +   E   WYLD+ ASNHM G+K+
Sbjct: 291 ASECKAPSNKKFEEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKS 350

Query: 175 LFVELNELVRGSVTFGNGSKVPVRGKGKIPFRLKNGDQQFISNVYYVPDMKSDILSL 345
           +F EL+E VRG+V  G+ SK+ V+GKG I  RLKNGD QFISNVYY+P MK++ILSL
Sbjct: 351 MFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSL 407


>emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 544

 Score =  125 bits (314), Expect = 4e-27
 Identities = 64/117 (54%), Positives = 83/117 (70%), Gaps = 3/117 (2%)
 Frame = +1

Query: 4   ASECR--SNDNVAETANFVEANAEVEHTLLL-TYQGERSNEPGNWYLDTAASNHMTGKKN 174
           ASEC+  SN    E AN+VE   + E  LL+ +Y+ +   E   WYLD+ ASNHM G+K+
Sbjct: 307 ASECKAPSNKKFKEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKS 366

Query: 175 LFVELNELVRGSVTFGNGSKVPVRGKGKIPFRLKNGDQQFISNVYYVPDMKSDILSL 345
           +F EL+E VRG+V  G+ SK+ V+GKG I  RLKNGD QFISNVYY+P MK++ILSL
Sbjct: 367 MFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSL 423


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis
           thaliana]
          Length = 1272

 Score =  125 bits (314), Expect = 4e-27
 Identities = 64/117 (54%), Positives = 83/117 (70%), Gaps = 3/117 (2%)
 Frame = +1

Query: 4   ASECR--SNDNVAETANFVEANAEVEHTLLL-TYQGERSNEPGNWYLDTAASNHMTGKKN 174
           ASEC+  SN    E AN+VE   + E  LL+ +Y+ +   E   WYLD+ ASNHM G+K+
Sbjct: 291 ASECKAPSNKKFKEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKS 350

Query: 175 LFVELNELVRGSVTFGNGSKVPVRGKGKIPFRLKNGDQQFISNVYYVPDMKSDILSL 345
           +F EL+E VRG+V  G+ SK+ V+GKG I  RLKNGD QFISNVYY+P MK++ILSL
Sbjct: 351 MFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSL 407


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  125 bits (314), Expect = 4e-27
 Identities = 64/117 (54%), Positives = 83/117 (70%), Gaps = 3/117 (2%)
 Frame = +1

Query: 4   ASECR--SNDNVAETANFVEANAEVEHTLLL-TYQGERSNEPGNWYLDTAASNHMTGKKN 174
           ASEC+  SN    E AN+VE   + E  LL+ +Y+ +   E   WYLD+ ASNHM G+K+
Sbjct: 291 ASECKAPSNKKFEEKANYVEEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKS 350

Query: 175 LFVELNELVRGSVTFGNGSKVPVRGKGKIPFRLKNGDQQFISNVYYVPDMKSDILSL 345
           +F EL+E VRG+V  G+ SK+ V+GKG I  RLKNGD QFISNVYY+P MK++ILSL
Sbjct: 351 MFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSL 407