BLASTX nr result

ID: Coptis24_contig00039645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039645
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001131166.1| uncharacterized protein LOC100192474 [Zea ma...    67   1e-09
ref|XP_003580460.1| PREDICTED: DAG protein, chloroplastic-like [...    67   2e-09
emb|CAD41861.2| OSJNBa0041A02.8 [Oryza sativa Japonica Group] gi...    67   2e-09
gb|AFK48881.1| unknown [Medicago truncatula]                           66   3e-09
ref|XP_002447049.1| hypothetical protein SORBIDRAFT_06g027510 [S...    66   3e-09

>ref|NP_001131166.1| uncharacterized protein LOC100192474 [Zea mays]
           gi|194690760|gb|ACF79464.1| unknown [Zea mays]
          Length = 217

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/65 (49%), Positives = 43/65 (66%)
 Frame = +2

Query: 5   DHYVGLLAHVFPSKEEARNKIYLVSCGRRFGFGAQIDANSADRIKGGSAILFKAEDHYYD 184
           D Y+  LA V  S+EEA+ KIY VSC R FGFG +ID  ++++++G   +LF   D Y D
Sbjct: 101 DCYIQTLAQVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVD 160

Query: 185 ARNKD 199
           A NKD
Sbjct: 161 AENKD 165


>ref|XP_003580460.1| PREDICTED: DAG protein, chloroplastic-like [Brachypodium
           distachyon]
          Length = 215

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/65 (49%), Positives = 43/65 (66%)
 Frame = +2

Query: 5   DHYVGLLAHVFPSKEEARNKIYLVSCGRRFGFGAQIDANSADRIKGGSAILFKAEDHYYD 184
           D Y+  LA V  S+EEA+ KIY VSC R FGFG +ID  ++++++G   +LF   D Y D
Sbjct: 99  DCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVD 158

Query: 185 ARNKD 199
           A NKD
Sbjct: 159 AENKD 163


>emb|CAD41861.2| OSJNBa0041A02.8 [Oryza sativa Japonica Group]
           gi|116310924|emb|CAH67862.1| B0403H10-OSIGBa0105A11.14
           [Oryza sativa Indica Group] gi|218195501|gb|EEC77928.1|
           hypothetical protein OsI_17265 [Oryza sativa Indica
           Group] gi|222629485|gb|EEE61617.1| hypothetical protein
           OsJ_16041 [Oryza sativa Japonica Group]
          Length = 223

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/65 (49%), Positives = 43/65 (66%)
 Frame = +2

Query: 5   DHYVGLLAHVFPSKEEARNKIYLVSCGRRFGFGAQIDANSADRIKGGSAILFKAEDHYYD 184
           D Y+  LA V  S+EEA+ KIY VSC R FGFG +ID  ++++++G   +LF   D Y D
Sbjct: 107 DCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVD 166

Query: 185 ARNKD 199
           A NKD
Sbjct: 167 AENKD 171


>gb|AFK48881.1| unknown [Medicago truncatula]
          Length = 217

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/65 (49%), Positives = 42/65 (64%)
 Frame = +2

Query: 5   DHYVGLLAHVFPSKEEARNKIYLVSCGRRFGFGAQIDANSADRIKGGSAILFKAEDHYYD 184
           D YV  LA V  S+EEA+ KIY VSC R FGFG +ID  ++++++G   +LF   D Y D
Sbjct: 104 DCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDGETSNKLEGLPGVLFVLPDSYVD 163

Query: 185 ARNKD 199
             NKD
Sbjct: 164 PENKD 168


>ref|XP_002447049.1| hypothetical protein SORBIDRAFT_06g027510 [Sorghum bicolor]
           gi|241938232|gb|EES11377.1| hypothetical protein
           SORBIDRAFT_06g027510 [Sorghum bicolor]
          Length = 216

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/65 (47%), Positives = 43/65 (66%)
 Frame = +2

Query: 5   DHYVGLLAHVFPSKEEARNKIYLVSCGRRFGFGAQIDANSADRIKGGSAILFKAEDHYYD 184
           D Y+  LA V  S+EEA+ +IY VSC R FGFG +ID  ++++++G   +LF   D Y D
Sbjct: 100 DCYIQTLAQVVGSEEEAKKRIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVD 159

Query: 185 ARNKD 199
           A NKD
Sbjct: 160 AENKD 164


Top