BLASTX nr result

ID: Coptis24_contig00039636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039636
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539197.1| PREDICTED: uncharacterized protein LOC100809...    97   2e-18
ref|XP_003540762.1| PREDICTED: uncharacterized protein LOC100793...    89   4e-16
ref|XP_002529435.1| electron transporter, putative [Ricinus comm...    87   1e-15
ref|XP_002314293.1| predicted protein [Populus trichocarpa] gi|2...    75   5e-12
ref|XP_003632160.1| PREDICTED: uncharacterized protein LOC100853...    72   6e-11

>ref|XP_003539197.1| PREDICTED: uncharacterized protein LOC100809848 [Glycine max]
          Length = 591

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/95 (53%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
 Frame = +2

Query: 5   IPSFLPPKVKELLAELAMVEDEISRLEKEISHLQKDFSQEQQFSQELKIKQWQNERLSNS 184
           IP+FLPPK++ELL EL MVE EI+RLE +IS LQ D   EQ+ ++E K K W    LSNS
Sbjct: 67  IPNFLPPKMRELLGELVMVEGEIARLESQISELQADLKHEQEITKESKPKTWNQGNLSNS 126

Query: 185 KDQLSLP--ENPKPTFQGVQERVPFETKALY*IGR 283
            + LS     NP P  + VQER+ FETKAL+ I +
Sbjct: 127 NNHLSTSPVPNPSPIRRNVQERMAFETKALHFISK 161


>ref|XP_003540762.1| PREDICTED: uncharacterized protein LOC100793574 [Glycine max]
          Length = 631

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/95 (49%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
 Frame = +2

Query: 5   IPSFLPPKVKELLAELAMVEDEISRLEKEISHLQKDFSQEQQFSQELKIKQWQNERLSNS 184
           IP+FLPPK++ELL EL M+E EI+RLE +IS LQ    +EQ+ + E K K W    L+NS
Sbjct: 108 IPNFLPPKMRELLGELVMIEGEIARLESQISQLQDGLKREQEITMESKPKTWNQGNLTNS 167

Query: 185 KDQLSLP--ENPKPTFQGVQERVPFETKALY*IGR 283
            + LS     NP P  +  QER+ FETKAL+ I +
Sbjct: 168 NNHLSTSPVPNPSPIRRIFQERMAFETKALHFISK 202


>ref|XP_002529435.1| electron transporter, putative [Ricinus communis]
           gi|223531112|gb|EEF32961.1| electron transporter,
           putative [Ricinus communis]
          Length = 589

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 47/93 (50%), Positives = 59/93 (63%)
 Frame = +2

Query: 5   IPSFLPPKVKELLAELAMVEDEISRLEKEISHLQKDFSQEQQFSQELKIKQWQNERLSNS 184
           IP+FLPPK KELLAELAM E EI RLE +IS L+    +EQ+  +E K KQWQ     N 
Sbjct: 67  IPNFLPPKAKELLAELAMTESEIIRLEAQISQLKLGLRREQEIMKETKSKQWQPRNTDNL 126

Query: 185 KDQLSLPENPKPTFQGVQERVPFETKALY*IGR 283
           +        P P  +GVQE++ FETKAL+ I +
Sbjct: 127 QSHF-WSTMPSPLHRGVQEKMGFETKALHFISK 158


>ref|XP_002314293.1| predicted protein [Populus trichocarpa] gi|222850701|gb|EEE88248.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
 Frame = +2

Query: 5   IPSFLPPKVKELLAELAMVEDEISRLEKEISHLQKDFSQEQQFSQELKIKQWQNE-RLSN 181
           +P FLPPK+KELL EL MVE EI+RLE ++S LQ     E+   ++ K KQ Q     SN
Sbjct: 60  LPDFLPPKMKELLTELVMVEGEIARLEGQLSQLQLGLKHEETIPKDAKSKQLQPAGNRSN 119

Query: 182 SKDQLSLPENPKP-TFQGVQERVPFETKALY*IGR 283
            +  +S    P P   +GVQ+++ FETKAL+ I +
Sbjct: 120 LQGHMSYTACPSPFIIKGVQDKMAFETKALHFISK 154


>ref|XP_003632160.1| PREDICTED: uncharacterized protein LOC100853642 [Vitis vinifera]
          Length = 700

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 43/93 (46%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
 Frame = +2

Query: 2   HIPSFLPPKVKELLAELAMVEDEISRLEKEISHLQKDFSQEQQFSQELKIKQWQNE-RLS 178
           +IP+FLPPK+KELLAE+AMVE EI+RL+ +I  LQ    +E++ +++ K KQ Q E  +S
Sbjct: 173 YIPNFLPPKMKELLAEIAMVEGEIARLQSQIRELQNSLDKEKEVTRKSKNKQGQFETSIS 232

Query: 179 NSKDQLSLPENPKPTFQGVQ--ERVPFETKALY 271
                L  P    P  +G    ER+ FETKAL+
Sbjct: 233 GPYCLLPSPPIAIPPKKGTSTPERLSFETKALH 265


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