BLASTX nr result

ID: Coptis24_contig00039621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039621
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24242.3| unnamed protein product [Vitis vinifera]              142   4e-32
ref|XP_002276041.1| PREDICTED: ABC transporter G family member 2...   142   4e-32
emb|CAN68542.1| hypothetical protein VITISV_020445 [Vitis vinifera]   142   4e-32
ref|XP_003556918.1| PREDICTED: ABC transporter G family member 2...   135   3e-30
ref|XP_002530909.1| ATP-binding cassette transporter, putative [...   134   8e-30

>emb|CBI24242.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score =  142 bits (357), Expect = 4e-32
 Identities = 68/88 (77%), Positives = 77/88 (87%)
 Frame = -1

Query: 264 SLCCQEKKPKPTNVLKSVSFVARSSEILAVVGPSGAGKSTLLRIISGRIRNKEFDPKTIS 85
           S C   KKPKP N+LK VSF A+SSEILA+VGPSG GKSTLLRIISGR++N+EFDPK+I 
Sbjct: 69  SFCRPWKKPKPINILKGVSFTAKSSEILAIVGPSGTGKSTLLRIISGRVKNEEFDPKSIL 128

Query: 84  LNDRPITSPTQLRRICGYVAQEDNLLPL 1
           LND PITSP QLR+ICG+VAQEDNLLPL
Sbjct: 129 LNDHPITSPAQLRKICGFVAQEDNLLPL 156


>ref|XP_002276041.1| PREDICTED: ABC transporter G family member 23 [Vitis vinifera]
          Length = 650

 Score =  142 bits (357), Expect = 4e-32
 Identities = 68/88 (77%), Positives = 77/88 (87%)
 Frame = -1

Query: 264 SLCCQEKKPKPTNVLKSVSFVARSSEILAVVGPSGAGKSTLLRIISGRIRNKEFDPKTIS 85
           S C   KKPKP N+LK VSF A+SSEILA+VGPSG GKSTLLRIISGR++N+EFDPK+I 
Sbjct: 69  SFCRPWKKPKPINILKGVSFTAKSSEILAIVGPSGTGKSTLLRIISGRVKNEEFDPKSIL 128

Query: 84  LNDRPITSPTQLRRICGYVAQEDNLLPL 1
           LND PITSP QLR+ICG+VAQEDNLLPL
Sbjct: 129 LNDHPITSPAQLRKICGFVAQEDNLLPL 156


>emb|CAN68542.1| hypothetical protein VITISV_020445 [Vitis vinifera]
          Length = 650

 Score =  142 bits (357), Expect = 4e-32
 Identities = 68/88 (77%), Positives = 77/88 (87%)
 Frame = -1

Query: 264 SLCCQEKKPKPTNVLKSVSFVARSSEILAVVGPSGAGKSTLLRIISGRIRNKEFDPKTIS 85
           S C   KKPKP N+LK VSF A+SSEILA+VGPSG GKSTLLRIISGR++N+EFDPK+I 
Sbjct: 69  SFCRPWKKPKPINILKGVSFTAKSSEILAIVGPSGTGKSTLLRIISGRVKNEEFDPKSIL 128

Query: 84  LNDRPITSPTQLRRICGYVAQEDNLLPL 1
           LND PITSP QLR+ICG+VAQEDNLLPL
Sbjct: 129 LNDHPITSPAQLRKICGFVAQEDNLLPL 156


>ref|XP_003556918.1| PREDICTED: ABC transporter G family member 23-like [Glycine max]
          Length = 656

 Score =  135 bits (341), Expect = 3e-30
 Identities = 65/101 (64%), Positives = 84/101 (83%), Gaps = 1/101 (0%)
 Frame = -1

Query: 300 LSYTTDQSSTLA-SLCCQEKKPKPTNVLKSVSFVARSSEILAVVGPSGAGKSTLLRIISG 124
           L YT     T   S C   +KPKP N+LKSVSF+ARSSEI+AVVGPSG GKSTLLRII+G
Sbjct: 60  LCYTLHPHKTTPFSFCHLTQKPKPVNILKSVSFIARSSEIVAVVGPSGTGKSTLLRIIAG 119

Query: 123 RIRNKEFDPKTISLNDRPITSPTQLRRICGYVAQEDNLLPL 1
           R++++ F+PK++S+ND+P+T+P QLR+ICG+VAQEDNLLP+
Sbjct: 120 RVKDEGFNPKSVSINDQPMTTPVQLRKICGFVAQEDNLLPM 160


>ref|XP_002530909.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223529531|gb|EEF31485.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 659

 Score =  134 bits (337), Expect = 8e-30
 Identities = 67/101 (66%), Positives = 86/101 (85%), Gaps = 1/101 (0%)
 Frame = -1

Query: 300 LSYTTDQSSTLA-SLCCQEKKPKPTNVLKSVSFVARSSEILAVVGPSGAGKSTLLRIISG 124
           LSYT   S ++A S C   +KPK  N+L+SV+F ARSSEILA+VGPSG GKS+LLRIISG
Sbjct: 66  LSYTISPSESIAASFCHLLQKPKSINILQSVTFQARSSEILAIVGPSGTGKSSLLRIISG 125

Query: 123 RIRNKEFDPKTISLNDRPITSPTQLRRICGYVAQEDNLLPL 1
           R+R+K+F+PK+IS+N R I+SP+QLR+ICG++AQEDNLLPL
Sbjct: 126 RVRDKDFNPKSISINGRYISSPSQLRKICGFIAQEDNLLPL 166


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