BLASTX nr result

ID: Coptis24_contig00039616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039616
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001062220.1| Os08g0512600 [Oryza sativa Japonica Group] g...    70   2e-10
ref|XP_003574763.1| PREDICTED: cyclin-dependent kinase B2-1-like...    69   3e-10
dbj|BAJ91091.1| predicted protein [Hordeum vulgare subsp. vulgare]     69   3e-10
ref|XP_002438785.1| hypothetical protein SORBIDRAFT_10g026160 [S...    69   3e-10
dbj|BAA19553.1| protein cdc2 kinase [Oryza sativa Japonica Group...    69   5e-10

>ref|NP_001062220.1| Os08g0512600 [Oryza sativa Japonica Group]
           gi|122222032|sp|Q0J4I1.1|CKB21_ORYSJ RecName:
           Full=Cyclin-dependent kinase B2-1; Short=CDKB2;1;
           Short=CDKB;2; AltName: Full=CDC2Os-3
           gi|113624189|dbj|BAF24134.1| Os08g0512600 [Oryza sativa
           Japonica Group] gi|218201442|gb|EEC83869.1| hypothetical
           protein OsI_29856 [Oryza sativa Indica Group]
           gi|222640853|gb|EEE68985.1| hypothetical protein
           OsJ_27911 [Oryza sativa Japonica Group]
          Length = 326

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/69 (44%), Positives = 50/69 (72%)
 Frame = -3

Query: 208 RDMEEYEQIEKLGTGSFGSVFKMRKKGTNEFVAVKKIRVPKLKDENGIPINILREIAVLK 29
           R M+ YE++EK+G G++G V+K R+K T   VA+KK R+P  +D+ G+P   LRE+++L+
Sbjct: 23  RAMDLYEKLEKVGEGTYGKVYKAREKATGRIVALKKTRLP--EDDEGVPPTALREVSLLR 80

Query: 28  MLNDGQHIV 2
           ML+   H+V
Sbjct: 81  MLSQDSHVV 89


>ref|XP_003574763.1| PREDICTED: cyclin-dependent kinase B2-1-like [Brachypodium
           distachyon]
          Length = 330

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 31/69 (44%), Positives = 50/69 (72%)
 Frame = -3

Query: 208 RDMEEYEQIEKLGTGSFGSVFKMRKKGTNEFVAVKKIRVPKLKDENGIPINILREIAVLK 29
           R M+ YE++EK+G G++G V+K R+K T   VA+KK R+P  +D+ G+P   LRE+++L+
Sbjct: 27  RAMDLYEKLEKVGEGTYGKVYKAREKATGRIVALKKTRLP--EDDEGVPPTALREVSLLR 84

Query: 28  MLNDGQHIV 2
           ML+   H+V
Sbjct: 85  MLSQDPHVV 93


>dbj|BAJ91091.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 326

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 31/69 (44%), Positives = 50/69 (72%)
 Frame = -3

Query: 208 RDMEEYEQIEKLGTGSFGSVFKMRKKGTNEFVAVKKIRVPKLKDENGIPINILREIAVLK 29
           R M+ YE++EK+G G++G V+K R+K T   VA+KK R+P  +D+ G+P   LRE+++L+
Sbjct: 23  RAMDLYEKLEKVGEGTYGKVYKAREKATGRIVALKKTRLP--EDDEGVPPTALREVSLLR 80

Query: 28  MLNDGQHIV 2
           ML+   H+V
Sbjct: 81  MLSQDPHVV 89


>ref|XP_002438785.1| hypothetical protein SORBIDRAFT_10g026160 [Sorghum bicolor]
           gi|241917008|gb|EER90152.1| hypothetical protein
           SORBIDRAFT_10g026160 [Sorghum bicolor]
          Length = 325

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 31/69 (44%), Positives = 50/69 (72%)
 Frame = -3

Query: 208 RDMEEYEQIEKLGTGSFGSVFKMRKKGTNEFVAVKKIRVPKLKDENGIPINILREIAVLK 29
           R M+ YE++EK+G G++G V+K R+K T   VA+KK R+P  +D+ G+P   LRE+++L+
Sbjct: 22  RAMDLYEKLEKVGEGTYGKVYKAREKATGRIVALKKTRLP--EDDEGVPPTALREVSLLR 79

Query: 28  MLNDGQHIV 2
           ML+   H+V
Sbjct: 80  MLSQDPHVV 88


>dbj|BAA19553.1| protein cdc2 kinase [Oryza sativa Japonica Group]
           gi|42408804|dbj|BAD10065.1| protein cdc2 kinase [Oryza
           sativa Japonica Group]
          Length = 302

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/67 (44%), Positives = 49/67 (73%)
 Frame = -3

Query: 202 MEEYEQIEKLGTGSFGSVFKMRKKGTNEFVAVKKIRVPKLKDENGIPINILREIAVLKML 23
           M+ YE++EK+G G++G V+K R+K T   VA+KK R+P  +D+ G+P   LRE+++L+ML
Sbjct: 1   MDLYEKLEKVGEGTYGKVYKAREKATGRIVALKKTRLP--EDDEGVPPTALREVSLLRML 58

Query: 22  NDGQHIV 2
           +   H+V
Sbjct: 59  SQDSHVV 65


Top