BLASTX nr result

ID: Coptis24_contig00039610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039610
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326854.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
ref|XP_003634016.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repe...    83   3e-14
ref|XP_002269257.1| PREDICTED: ankyrin repeat-containing protein...    80   2e-13
ref|XP_002511034.1| ankyrin repeat-containing protein, putative ...    79   3e-13
ref|XP_003527770.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repe...    77   2e-12

>ref|XP_002326854.1| predicted protein [Populus trichocarpa] gi|222835169|gb|EEE73604.1|
           predicted protein [Populus trichocarpa]
          Length = 459

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/81 (49%), Positives = 59/81 (72%)
 Frame = +2

Query: 2   RTPLHCAVINGRVDVVGELLLACSPDCLRALTVRKETVLHLALKYDQIEVFEVLVKRFRA 181
           +TPLH A + GRVD+V EL+ AC P  ++ +T+  ETVLH+A+K +Q E  +VL++  + 
Sbjct: 105 KTPLHLAAMKGRVDIVKELVCAC-PQSVKEVTICGETVLHVAVKSNQAEAVKVLLEEIKK 163

Query: 182 ENGEEIVNWEDNEGNTILHLA 244
            +  EIVNW+D +GNTI+HLA
Sbjct: 164 LDMMEIVNWKDKDGNTIMHLA 184


>ref|XP_003634016.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat-containing protein
           At2g01680-like [Vitis vinifera]
          Length = 450

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/81 (49%), Positives = 56/81 (69%)
 Frame = +2

Query: 2   RTPLHCAVINGRVDVVGELLLACSPDCLRALTVRKETVLHLALKYDQIEVFEVLVKRFRA 181
           +TPLHCA + G+V+VV  +L AC  +C+  +TV+KE  LHLA+K  Q E   VLV++ R 
Sbjct: 105 KTPLHCAAMKGKVNVVRVILSACK-ECIEDVTVQKEIALHLAVKNSQYEAVRVLVEKVRE 163

Query: 182 ENGEEIVNWEDNEGNTILHLA 244
              E+++N +D  GNTILHLA
Sbjct: 164 MRREDVLNMKDEHGNTILHLA 184


>ref|XP_002269257.1| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis
           vinifera]
          Length = 430

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/80 (51%), Positives = 53/80 (66%)
 Frame = +2

Query: 5   TPLHCAVINGRVDVVGELLLACSPDCLRALTVRKETVLHLALKYDQIEVFEVLVKRFRAE 184
           TPLH A I GR D +  LLL+ SP C+   T R ET LH+A++ +Q+E   VLV+  +  
Sbjct: 109 TPLHYASIKGRADTIS-LLLSSSPLCVVEETERGETALHIAVRNNQLEALRVLVEGLKRS 167

Query: 185 NGEEIVNWEDNEGNTILHLA 244
           N   I+NW+D EGNTILHLA
Sbjct: 168 NNLVIINWKDREGNTILHLA 187


>ref|XP_002511034.1| ankyrin repeat-containing protein, putative [Ricinus communis]
           gi|223550149|gb|EEF51636.1| ankyrin repeat-containing
           protein, putative [Ricinus communis]
          Length = 320

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/81 (48%), Positives = 53/81 (65%)
 Frame = +2

Query: 2   RTPLHCAVINGRVDVVGELLLACSPDCLRALTVRKETVLHLALKYDQIEVFEVLVKRFRA 181
           +TPLH A I GR +V   +L++C PDC+  +TVR ET +H A+K +Q     VLV   R 
Sbjct: 105 KTPLHLAAIKGRAEVTSVMLMSC-PDCIEDVTVRGETAVHQAVKNNQFHAVNVLVDWIRG 163

Query: 182 ENGEEIVNWEDNEGNTILHLA 244
            N EE++N +D  GNT+LHLA
Sbjct: 164 TNREEMLNVKDELGNTVLHLA 184


>ref|XP_003527770.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat-containing protein
           At5g02620-like [Glycine max]
          Length = 273

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
 Frame = +2

Query: 5   TPLHCAVINGRVDVVGELLLACSPDCLRALTVRKETVLHLALKYDQIEVFEVLV------ 166
           TPLH A   GR D+V + L AC P  +  +TVR ET LH+A+KYDQ +  EVLV      
Sbjct: 107 TPLHIATQTGRTDLVAKFLSAC-PGSIEDVTVRSETALHIAVKYDQFKALEVLVGWLQRN 165

Query: 167 -KRFRAENGEEIVNWEDNEGNTILHLA 244
            +R   +  + ++NW+D  GNT LHL+
Sbjct: 166 CQRLAEDREKRVLNWQDEVGNTALHLS 192


Top