BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039608
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308653.1| predicted protein [Populus trichocarpa] gi|1...   122   4e-26
ref|XP_002324286.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26
ref|XP_002285376.1| PREDICTED: uncharacterized RNA-binding prote...   119   2e-25
emb|CAN76349.1| hypothetical protein VITISV_028497 [Vitis vinifera]   119   2e-25
ref|NP_001236842.1| uncharacterized protein LOC100499847 [Glycin...   119   3e-25

>ref|XP_002308653.1| predicted protein [Populus trichocarpa] gi|118482028|gb|ABK92945.1|
           unknown [Populus trichocarpa]
           gi|222854629|gb|EEE92176.1| predicted protein [Populus
           trichocarpa]
          Length = 159

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/90 (61%), Positives = 60/90 (66%), Gaps = 11/90 (12%)
 Frame = -1

Query: 277 MSRPGDWNCRSCQHLNFSWRDTCQACGDSRSGE-----------SYGSIGLCGPAILPGD 131
           MSRPGDWNCRSCQHLNF  RD+CQ CGD R GE           S GS G  GP + PGD
Sbjct: 1   MSRPGDWNCRSCQHLNFQRRDSCQRCGDPRPGERDHYGSFGGRSSGGSFGFTGPDVRPGD 60

Query: 130 WCCAARNCGVHNFASRMICFKCGALRNESA 41
           W C A NCG HNFASR  CFKCG  ++ES+
Sbjct: 61  WYCTAGNCGAHNFASRSSCFKCGVSKDESS 90



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/98 (34%), Positives = 43/98 (43%), Gaps = 21/98 (21%)
 Frame = -1

Query: 271 RPGDWNCRS--CQHLNFSWRDTCQACGDSRSGESYGSI-----------------GLCGP 149
           RPGDW C +  C   NF+ R +C  CG S+   S G +                 G  G 
Sbjct: 57  RPGDWYCTAGNCGAHNFASRSSCFKCGVSKDESSGGGLDADMSRMRGYGFGGGGGGGSGS 116

Query: 148 AI--LPGDWCCAARNCGVHNFASRMICFKCGALRNESA 41
           +     GDW C    C  HNFASR  C++C A R  S+
Sbjct: 117 SRNWKSGDWICTRSGCNEHNFASRTECYRCNAPRESSS 154


>ref|XP_002324286.1| predicted protein [Populus trichocarpa] gi|222865720|gb|EEF02851.1|
           predicted protein [Populus trichocarpa]
          Length = 155

 Score =  120 bits (302), Expect = 9e-26
 Identities = 54/89 (60%), Positives = 60/89 (67%), Gaps = 10/89 (11%)
 Frame = -1

Query: 277 MSRPGDWNCRSCQHLNFSWRDTCQACGDSRSGE----------SYGSIGLCGPAILPGDW 128
           MSRPGDWNCRSCQHLNF  RD+CQ CGD R GE          S GS G  GP + PGDW
Sbjct: 1   MSRPGDWNCRSCQHLNFQRRDSCQRCGDPRPGERDHYGSFGGRSGGSFGFTGPDVRPGDW 60

Query: 127 CCAARNCGVHNFASRMICFKCGALRNESA 41
            C+  NCG HNFASR  CFKCG  ++ES+
Sbjct: 61  YCSVGNCGAHNFASRSSCFKCGMSKDESS 89


>ref|XP_002285376.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Vitis
           vinifera] gi|297743402|emb|CBI36269.3| unnamed protein
           product [Vitis vinifera]
          Length = 150

 Score =  119 bits (299), Expect = 2e-25
 Identities = 56/95 (58%), Positives = 64/95 (67%), Gaps = 9/95 (9%)
 Frame = -1

Query: 277 MSRPGDWNCRSCQHLNFSWRDTCQACGDSRSGE----SYG-----SIGLCGPAILPGDWC 125
           MSRPGDWNCRSCQH+NF  RD+CQ CGD +SG     S+G     S G  G  + PGDW 
Sbjct: 1   MSRPGDWNCRSCQHMNFQRRDSCQRCGDPKSGGGDFGSFGGRGGSSFGFTGSDVRPGDWY 60

Query: 124 CAARNCGVHNFASRMICFKCGALRNESATVYQNAM 20
           C A NCG HNFASR  CFKCGA ++ESA  Y + M
Sbjct: 61  CNAGNCGAHNFASRSNCFKCGAFKDESAGGYDSDM 95


>emb|CAN76349.1| hypothetical protein VITISV_028497 [Vitis vinifera]
          Length = 137

 Score =  119 bits (299), Expect = 2e-25
 Identities = 56/95 (58%), Positives = 64/95 (67%), Gaps = 9/95 (9%)
 Frame = -1

Query: 277 MSRPGDWNCRSCQHLNFSWRDTCQACGDSRSGE----SYG-----SIGLCGPAILPGDWC 125
           MSRPGDWNCRSCQH+NF  RD+CQ CGD +SG     S+G     S G  G  + PGDW 
Sbjct: 1   MSRPGDWNCRSCQHMNFQRRDSCQRCGDPKSGGGDFGSFGGRGGSSFGFTGSDVRPGDWY 60

Query: 124 CAARNCGVHNFASRMICFKCGALRNESATVYQNAM 20
           C A NCG HNFASR  CFKCGA ++ESA  Y + M
Sbjct: 61  CNAGNCGAHNFASRSNCFKCGAFKDESAGGYDSDM 95


>ref|NP_001236842.1| uncharacterized protein LOC100499847 [Glycine max]
           gi|255627109|gb|ACU13899.1| unknown [Glycine max]
          Length = 144

 Score =  119 bits (298), Expect = 3e-25
 Identities = 53/95 (55%), Positives = 63/95 (66%), Gaps = 10/95 (10%)
 Frame = -1

Query: 277 MSRPGDWNCRSCQHLNFSWRDTCQACGDSRSGESY----------GSIGLCGPAILPGDW 128
           MSRPGDWNCRSCQHLNF  RD+CQ CGD++ G+             S GL G  + PGDW
Sbjct: 1   MSRPGDWNCRSCQHLNFQRRDSCQRCGDAKYGDRVDFGGFGGRGGSSFGLTGSDVRPGDW 60

Query: 127 CCAARNCGVHNFASRMICFKCGALRNESATVYQNA 23
            CAA NCG HNFASR  CFKCGA +++ A  Y ++
Sbjct: 61  YCAAANCGAHNFASRSSCFKCGAFKDDLAGSYNSS 95