BLASTX nr result

ID: Coptis24_contig00039598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039598
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ63935.1| cellulose synthase [Pinus radiata]                     136   2e-31
emb|CAN75642.1| hypothetical protein VITISV_029179 [Vitis vinifera]   132   4e-31
emb|CBI37043.3| unnamed protein product [Vitis vinifera]              132   4e-31
ref|XP_002273575.1| PREDICTED: probable cellulose synthase A cat...   132   4e-31
ref|XP_001753310.1| putative cellulose synthase 3, glycosyltrans...   134   5e-31

>gb|AAQ63935.1| cellulose synthase [Pinus radiata]
          Length = 1096

 Score =  136 bits (342), Expect(2) = 2e-31
 Identities = 62/83 (74%), Positives = 70/83 (84%)
 Frame = +1

Query: 133 VRVSALLTNGAYILNLEHNQYINNSNAFLEAMCFMMDPTTTNKVCYVQFPQRFDGVDAID 312
           VRVSA+LTNG Y+LNL+ + YINNS A  EAMCFMMDPT   KVCYVQFPQRFDG+D  D
Sbjct: 565 VRVSAVLTNGPYMLNLDCDHYINNSRALREAMCFMMDPTLGKKVCYVQFPQRFDGIDRND 624

Query: 313 RYANHTTIFYDANMKGLDGIQGP 381
           RYANH T+F+D N+KGLDGIQGP
Sbjct: 625 RYANHNTVFFDINLKGLDGIQGP 647



 Score = 24.3 bits (51), Expect(2) = 2e-31
 Identities = 8/14 (57%), Positives = 14/14 (100%)
 Frame = +3

Query: 6   FQHNEKAGSLNALV 47
           F+H++KAG++N+LV
Sbjct: 552 FEHHKKAGAMNSLV 565


>emb|CAN75642.1| hypothetical protein VITISV_029179 [Vitis vinifera]
          Length = 1036

 Score =  132 bits (332), Expect(2) = 4e-31
 Identities = 61/83 (73%), Positives = 70/83 (84%)
 Frame = +1

Query: 133 VRVSALLTNGAYILNLEHNQYINNSNAFLEAMCFMMDPTTTNKVCYVQFPQRFDGVDAID 312
           VRVSALLTNG YILNL+ + YINNS  FLEAMCF+MDP+   K+C+VQFPQRF+GVDA D
Sbjct: 516 VRVSALLTNGTYILNLDSDHYINNSRTFLEAMCFLMDPSN-QKICFVQFPQRFEGVDAND 574

Query: 313 RYANHTTIFYDANMKGLDGIQGP 381
           RY +H TIFYD N+KG DGIQGP
Sbjct: 575 RYGSHNTIFYDINLKGFDGIQGP 597



 Score = 27.3 bits (59), Expect(2) = 4e-31
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 6   FQHNEKAGSLNALVHYEVL 62
           F HN KAG++NALV    L
Sbjct: 503 FHHNNKAGAMNALVRVSAL 521


>emb|CBI37043.3| unnamed protein product [Vitis vinifera]
          Length = 904

 Score =  132 bits (332), Expect(2) = 4e-31
 Identities = 61/83 (73%), Positives = 70/83 (84%)
 Frame = +1

Query: 133 VRVSALLTNGAYILNLEHNQYINNSNAFLEAMCFMMDPTTTNKVCYVQFPQRFDGVDAID 312
           VRVSALLTNG YILNL+ + YINNS  FLEAMCF+MDP+   K+C+VQFPQRF+GVDA D
Sbjct: 344 VRVSALLTNGTYILNLDSDHYINNSRTFLEAMCFLMDPSN-QKICFVQFPQRFEGVDAND 402

Query: 313 RYANHTTIFYDANMKGLDGIQGP 381
           RY +H TIFYD N+KG DGIQGP
Sbjct: 403 RYGSHNTIFYDINLKGFDGIQGP 425



 Score = 27.3 bits (59), Expect(2) = 4e-31
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 6   FQHNEKAGSLNALVHYEVL 62
           F HN KAG++NALV    L
Sbjct: 331 FHHNNKAGAMNALVRVSAL 349


>ref|XP_002273575.1| PREDICTED: probable cellulose synthase A catalytic subunit 8
           [UDP-forming]-like [Vitis vinifera]
          Length = 887

 Score =  132 bits (332), Expect(2) = 4e-31
 Identities = 61/83 (73%), Positives = 70/83 (84%)
 Frame = +1

Query: 133 VRVSALLTNGAYILNLEHNQYINNSNAFLEAMCFMMDPTTTNKVCYVQFPQRFDGVDAID 312
           VRVSALLTNG YILNL+ + YINNS  FLEAMCF+MDP+   K+C+VQFPQRF+GVDA D
Sbjct: 369 VRVSALLTNGTYILNLDSDHYINNSRTFLEAMCFLMDPSN-QKICFVQFPQRFEGVDAND 427

Query: 313 RYANHTTIFYDANMKGLDGIQGP 381
           RY +H TIFYD N+KG DGIQGP
Sbjct: 428 RYGSHNTIFYDINLKGFDGIQGP 450



 Score = 27.3 bits (59), Expect(2) = 4e-31
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 6   FQHNEKAGSLNALVHYEVL 62
           F HN KAG++NALV    L
Sbjct: 356 FHHNNKAGAMNALVRVSAL 374


>ref|XP_001753310.1| putative cellulose synthase 3, glycosyltransferase family 2
           [Physcomitrella patens subsp. patens]
           gi|162695596|gb|EDQ81939.1| putative cellulose synthase
           3, glycosyltransferase family 2 [Physcomitrella patens
           subsp. patens]
          Length = 1093

 Score =  134 bits (338), Expect(2) = 5e-31
 Identities = 62/83 (74%), Positives = 69/83 (83%)
 Frame = +1

Query: 133 VRVSALLTNGAYILNLEHNQYINNSNAFLEAMCFMMDPTTTNKVCYVQFPQRFDGVDAID 312
           VRVSA+LTN  Y+LNL+ + YINNS A  EAMCFMMDPT   KVCYVQFPQRFDG+D  D
Sbjct: 548 VRVSAVLTNAPYMLNLDCDHYINNSKAIREAMCFMMDPTVGPKVCYVQFPQRFDGIDRND 607

Query: 313 RYANHTTIFYDANMKGLDGIQGP 381
           RYANH T+F+D NMKGLDGIQGP
Sbjct: 608 RYANHNTVFFDINMKGLDGIQGP 630



 Score = 24.6 bits (52), Expect(2) = 5e-31
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = +3

Query: 6   FQHNEKAGSLNALV 47
           F H++KAG++NALV
Sbjct: 535 FNHHKKAGAMNALV 548


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