BLASTX nr result
ID: Coptis24_contig00039587
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00039587 (311 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268191.1| PREDICTED: uncharacterized protein LOC100246... 89 4e-16 emb|CAN83208.1| hypothetical protein VITISV_009141 [Vitis vinifera] 89 4e-16 emb|CBI37224.3| unnamed protein product [Vitis vinifera] 87 1e-15 ref|XP_002301834.1| predicted protein [Populus trichocarpa] gi|2... 84 1e-14 dbj|BAK04620.1| predicted protein [Hordeum vulgare subsp. vulgare] 80 1e-13 >ref|XP_002268191.1| PREDICTED: uncharacterized protein LOC100246307 [Vitis vinifera] Length = 1012 Score = 89.0 bits (219), Expect = 4e-16 Identities = 44/58 (75%), Positives = 50/58 (86%), Gaps = 2/58 (3%) Frame = -1 Query: 170 EFSLKETSPHLGGGAFNKDKTSSTYDLVEQVQYLYVRVVKARDISTM--GEVTAEVKL 3 EFSLKETSPHLGGG ++DKTSSTYDLVEQ+QYLYVR++K RD+S GEV AEVKL Sbjct: 242 EFSLKETSPHLGGGLLHRDKTSSTYDLVEQMQYLYVRILKCRDVSASGGGEVMAEVKL 299 >emb|CAN83208.1| hypothetical protein VITISV_009141 [Vitis vinifera] Length = 1012 Score = 89.0 bits (219), Expect = 4e-16 Identities = 44/58 (75%), Positives = 50/58 (86%), Gaps = 2/58 (3%) Frame = -1 Query: 170 EFSLKETSPHLGGGAFNKDKTSSTYDLVEQVQYLYVRVVKARDISTM--GEVTAEVKL 3 EFSLKETSPHLGGG ++DKTSSTYDLVEQ+QYLYVR++K RD+S GEV AEVKL Sbjct: 242 EFSLKETSPHLGGGLLHRDKTSSTYDLVEQMQYLYVRILKCRDVSASGGGEVMAEVKL 299 >emb|CBI37224.3| unnamed protein product [Vitis vinifera] Length = 868 Score = 87.0 bits (214), Expect = 1e-15 Identities = 43/57 (75%), Positives = 49/57 (85%), Gaps = 2/57 (3%) Frame = -1 Query: 167 FSLKETSPHLGGGAFNKDKTSSTYDLVEQVQYLYVRVVKARDISTM--GEVTAEVKL 3 FSLKETSPHLGGG ++DKTSSTYDLVEQ+QYLYVR++K RD+S GEV AEVKL Sbjct: 225 FSLKETSPHLGGGLLHRDKTSSTYDLVEQMQYLYVRILKCRDVSASGGGEVMAEVKL 281 >ref|XP_002301834.1| predicted protein [Populus trichocarpa] gi|222843560|gb|EEE81107.1| predicted protein [Populus trichocarpa] Length = 1023 Score = 84.0 bits (206), Expect = 1e-14 Identities = 45/58 (77%), Positives = 48/58 (82%), Gaps = 2/58 (3%) Frame = -1 Query: 170 EFSLKETSPHLGGGAFNKDKTSSTYDLVEQVQYLYVRVVKAR--DISTMGEVTAEVKL 3 EFSLKETSPHLGGG NKDKTSSTYDLVE +QYLYVRVVKA+ + GEV AEVKL Sbjct: 252 EFSLKETSPHLGGGRLNKDKTSSTYDLVELMQYLYVRVVKAKYNMLFGGGEVVAEVKL 309 >dbj|BAK04620.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 1015 Score = 80.5 bits (197), Expect = 1e-13 Identities = 40/56 (71%), Positives = 46/56 (82%) Frame = -1 Query: 170 EFSLKETSPHLGGGAFNKDKTSSTYDLVEQVQYLYVRVVKARDISTMGEVTAEVKL 3 +FSLKET PHLGGG DK S+TYDLVEQ+QYLYVRVV+AR ++T GE AEVKL Sbjct: 245 DFSLKETRPHLGGG-LTADKASATYDLVEQMQYLYVRVVRARGVATPGEAVAEVKL 299