BLASTX nr result
ID: Coptis24_contig00039584
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00039584 (280 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002532784.1| pentatricopeptide repeat-containing protein,... 78 6e-13 emb|CBI26532.3| unnamed protein product [Vitis vinifera] 78 8e-13 ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat... 78 8e-13 ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat... 76 3e-12 ref|NP_001170632.1| uncharacterized protein LOC100384682 [Zea ma... 72 4e-11 >ref|XP_002532784.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223527472|gb|EEF29603.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 487 Score = 78.2 bits (191), Expect = 6e-13 Identities = 42/105 (40%), Positives = 66/105 (62%), Gaps = 12/105 (11%) Frame = +1 Query: 1 AERHLKLMEMKGFKSNFVASNCLLNGLCQ------AMKVFGRMEYKDDFTYS------CK 144 A RH++ M M GF S VA NC+++GLC+ A+K+F M+ +D FTYS CK Sbjct: 371 ARRHMQHMNMMGFDSCLVALNCMVDGLCKNGQIDHAVKLFESMKMRDSFTYSSLVHNLCK 430 Query: 145 AKQFFAAARLIKTSLIEDVKVLKSAQKATVFGLRSTGYKREASQL 279 +F A++L+ + L +K+L SAQ+ + GLR +G+++EA +L Sbjct: 431 NGRFHRASKLLLSCLRSGMKILPSAQRVVISGLRYSGFQKEARKL 475 >emb|CBI26532.3| unnamed protein product [Vitis vinifera] Length = 441 Score = 77.8 bits (190), Expect = 8e-13 Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 12/105 (11%) Frame = +1 Query: 1 AERHLKLMEMKGFKSNFVASNCLLNGLCQ------AMKVFGRMEYKDDFTYS------CK 144 A RHLK M GF S VA NC+++GLC+ A+K+F ME KD FTYS CK Sbjct: 325 ALRHLKNMTKMGFDSTLVAQNCVIDGLCKVGQLDHAIKMFASMEVKDSFTYSSMVHNLCK 384 Query: 145 AKQFFAAARLIKTSLIEDVKVLKSAQKATVFGLRSTGYKREASQL 279 A+++ A+RL+ L +K+L++ Q++ + GL +GY EA +L Sbjct: 385 ARRYRHASRLLLACLRGGMKILRANQRSVIDGLCYSGYTSEARRL 429 >ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat-containing protein At4g17915-like [Vitis vinifera] Length = 457 Score = 77.8 bits (190), Expect = 8e-13 Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 12/105 (11%) Frame = +1 Query: 1 AERHLKLMEMKGFKSNFVASNCLLNGLCQ------AMKVFGRMEYKDDFTYS------CK 144 A RHLK M GF S VA NC+++GLC+ A+K+F ME KD FTYS CK Sbjct: 341 ALRHLKNMTKMGFDSTLVAQNCVIDGLCKVGQLDHAIKMFASMEVKDSFTYSSMVHNLCK 400 Query: 145 AKQFFAAARLIKTSLIEDVKVLKSAQKATVFGLRSTGYKREASQL 279 A+++ A+RL+ L +K+L++ Q++ + GL +GY EA +L Sbjct: 401 ARRYRHASRLLLACLRGGMKILRANQRSVIDGLCYSGYTSEARRL 445 >ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat-containing protein At4g17915-like [Glycine max] Length = 461 Score = 75.9 bits (185), Expect = 3e-12 Identities = 42/105 (40%), Positives = 64/105 (60%), Gaps = 12/105 (11%) Frame = +1 Query: 1 AERHLKLMEMKGFKSNFVASNCLLNGLCQA------MKVFGRMEYKDDFTYS------CK 144 A+RHL M GF SN VA NC L+GL +A +++F ME KD FTY+ C+ Sbjct: 346 AQRHLNYMNSLGFGSNLVAFNCFLDGLGKAGHIDHALRLFEVMEVKDSFTYTIVVHNLCR 405 Query: 145 AKQFFAAARLIKTSLIEDVKVLKSAQKATVFGLRSTGYKREASQL 279 A++F A++++ + L +VL++ Q+A + GLRS GY EA ++ Sbjct: 406 ARRFLCASKVLVSCLKCGYQVLRATQRAVIVGLRSIGYANEARKV 450 >ref|NP_001170632.1| uncharacterized protein LOC100384682 [Zea mays] gi|238006488|gb|ACR34279.1| unknown [Zea mays] gi|413925463|gb|AFW65395.1| hypothetical protein ZEAMMB73_565010 [Zea mays] Length = 462 Score = 72.4 bits (176), Expect = 4e-11 Identities = 39/101 (38%), Positives = 61/101 (60%), Gaps = 12/101 (11%) Frame = +1 Query: 1 AERHLKLMEMKGFKSNFVASNCLLNGLCQ------AMKVFGRMEYKDDFTYS------CK 144 AE+ + MEM G +SN VA NCL++ LC+ A+K+ M+ KDDF+Y+ CK Sbjct: 346 AEKQIWSMEMMGMQSNVVAYNCLIDALCKCHEVDAAIKILHSMKLKDDFSYTSLVHGLCK 405 Query: 145 AKQFFAAARLIKTSLIEDVKVLKSAQKATVFGLRSTGYKRE 267 ++ A++ ++ L E VL SA++A + GLRS G+K + Sbjct: 406 VGRYHMASKFLRICLHEGNNVLASAKRAVISGLRSAGFKND 446