BLASTX nr result

ID: Coptis24_contig00039548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039548
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21881.3| unnamed protein product [Vitis vinifera]              123   1e-26
ref|XP_002274918.1| PREDICTED: uncharacterized protein LOC100262...   123   1e-26
emb|CAN78517.1| hypothetical protein VITISV_039749 [Vitis vinifera]   123   1e-26
ref|XP_002327911.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_002517880.1| protein with unknown function [Ricinus commu...   109   3e-22

>emb|CBI21881.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  123 bits (309), Expect = 1e-26
 Identities = 68/112 (60%), Positives = 77/112 (68%)
 Frame = +2

Query: 8   LTGLKKTQTAKKIASLVRNPSTLKPKNQSQLSQTKSENRSIARSAMTAKKTVRTPDFAQE 187
           LT  KK QTAKKIASLV+NPS LKPKN SQLSQ K +  S  R     K    T + AQE
Sbjct: 222 LTDSKKHQTAKKIASLVKNPSALKPKNHSQLSQAKGKPPSSVRRDPRVKNPTTTHNLAQE 281

Query: 188 NQAIKRQKLDGGQSRQILNVKPQNLPHNKSRLGLTSGATNKCPSTSKPRKED 343
            QAIKRQKL+GG++RQILNVKPQNLPH         G++N CPST+K  KED
Sbjct: 282 YQAIKRQKLEGGKTRQILNVKPQNLPH--------KGSSNLCPSTAKTSKED 325


>ref|XP_002274918.1| PREDICTED: uncharacterized protein LOC100262517 [Vitis vinifera]
          Length = 805

 Score =  123 bits (309), Expect = 1e-26
 Identities = 68/112 (60%), Positives = 77/112 (68%)
 Frame = +2

Query: 8   LTGLKKTQTAKKIASLVRNPSTLKPKNQSQLSQTKSENRSIARSAMTAKKTVRTPDFAQE 187
           LT  KK QTAKKIASLV+NPS LKPKN SQLSQ K +  S  R     K    T + AQE
Sbjct: 222 LTDSKKHQTAKKIASLVKNPSALKPKNHSQLSQAKGKPPSSVRRDPRVKNPTTTHNLAQE 281

Query: 188 NQAIKRQKLDGGQSRQILNVKPQNLPHNKSRLGLTSGATNKCPSTSKPRKED 343
            QAIKRQKL+GG++RQILNVKPQNLPH         G++N CPST+K  KED
Sbjct: 282 YQAIKRQKLEGGKTRQILNVKPQNLPH--------KGSSNLCPSTAKTSKED 325


>emb|CAN78517.1| hypothetical protein VITISV_039749 [Vitis vinifera]
          Length = 941

 Score =  123 bits (309), Expect = 1e-26
 Identities = 68/112 (60%), Positives = 77/112 (68%)
 Frame = +2

Query: 8   LTGLKKTQTAKKIASLVRNPSTLKPKNQSQLSQTKSENRSIARSAMTAKKTVRTPDFAQE 187
           LT  KK QTAKKIASLV+NPS LKPKN SQLSQ K +  S  R     K    T + AQE
Sbjct: 222 LTDSKKHQTAKKIASLVKNPSALKPKNHSQLSQAKGKPPSSVRRDPRVKNPTTTHNLAQE 281

Query: 188 NQAIKRQKLDGGQSRQILNVKPQNLPHNKSRLGLTSGATNKCPSTSKPRKED 343
            QAIKRQKL+GG++RQILNVKPQNLPH         G++N CPST+K  KED
Sbjct: 282 YQAIKRQKLEGGKTRQILNVKPQNLPH--------KGSSNLCPSTAKTSKED 325


>ref|XP_002327911.1| predicted protein [Populus trichocarpa] gi|222837320|gb|EEE75699.1|
           predicted protein [Populus trichocarpa]
          Length = 811

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/112 (51%), Positives = 75/112 (66%)
 Frame = +2

Query: 8   LTGLKKTQTAKKIASLVRNPSTLKPKNQSQLSQTKSENRSIARSAMTAKKTVRTPDFAQE 187
           LT  KK  +A+ IASLVRNPS LKPK+QSQ SQ K    +  +     K    T + AQE
Sbjct: 203 LTDSKKNHSARHIASLVRNPSLLKPKSQSQSSQVKGIKPASVKKDRNVKNVAGTTNLAQE 262

Query: 188 NQAIKRQKLDGGQSRQILNVKPQNLPHNKSRLGLTSGATNKCPSTSKPRKED 343
           NQAIK+QKL+GG+SRQILN KP     +KS+LGL+SG++N C S +   K++
Sbjct: 263 NQAIKKQKLEGGRSRQILNAKPPQPLTHKSKLGLSSGSSNLCSSVANKMKKE 314


>ref|XP_002517880.1| protein with unknown function [Ricinus communis]
           gi|223542862|gb|EEF44398.1| protein with unknown
           function [Ricinus communis]
          Length = 702

 Score =  109 bits (272), Expect = 3e-22
 Identities = 59/112 (52%), Positives = 73/112 (65%)
 Frame = +2

Query: 5   LLTGLKKTQTAKKIASLVRNPSTLKPKNQSQLSQTKSENRSIARSAMTAKKTVRTPDFAQ 184
           LLT  KK Q+ + IA+LVRNPS LKPKNQSQ SQ K       +     K T      AQ
Sbjct: 168 LLTNSKKHQSGRHIATLVRNPSALKPKNQSQSSQVKGFKPESVKRETKIKNTPGASILAQ 227

Query: 185 ENQAIKRQKLDGGQSRQILNVKPQNLPHNKSRLGLTSGATNKCPSTSKPRKE 340
           ENQAIKRQKL+GG+SR+ILNVKP    H+KS+LGL SG++N   +    ++E
Sbjct: 228 ENQAIKRQKLEGGRSREILNVKPPQPLHHKSKLGLVSGSSNSSVANKMKKEE 279


Top