BLASTX nr result

ID: Coptis24_contig00039540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039540
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269771.2| PREDICTED: putative disease resistance prote...   123   2e-26
emb|CBI34078.3| unnamed protein product [Vitis vinifera]              109   2e-22
ref|NP_001044526.1| Os01g0799000 [Oryza sativa Japonica Group] g...   107   1e-21
tpg|DAA57255.1| TPA: hypothetical protein ZEAMMB73_808803 [Zea m...   106   2e-21
ref|XP_002325848.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21

>ref|XP_002269771.2| PREDICTED: putative disease resistance protein At3g14460-like
           [Vitis vinifera]
          Length = 835

 Score =  123 bits (308), Expect = 2e-26
 Identities = 58/120 (48%), Positives = 80/120 (66%)
 Frame = +1

Query: 4   YNKLGENFRKCLLCLSIFPQGSIIKKRTIIYWWIGEGFVKATAEKTAEEVGEKWFNDLVE 183
           Y  L    + CLLC +IFP+ +II KR +IYWWIGEGFV+ T EKTAEE+GE++F  L++
Sbjct: 152 YTILDLPLKMCLLCFAIFPEKAIIMKRQLIYWWIGEGFVRKTKEKTAEEMGEEYFQKLID 211

Query: 184 GNWIHPAKNKSSKVVREFTMDPWVRWLVIYLARQECFFDLDETGMPSSYLIKSSRACLLK 363
              I+P   K++ VV   TM PW+R +VI +A++  FFDLD  G P++   +S R C  K
Sbjct: 212 MGLIYPKYKKANPVVDSCTMHPWIRRMVITVAKKAEFFDLDRRGAPTAVSSQSRRICFAK 271


>emb|CBI34078.3| unnamed protein product [Vitis vinifera]
          Length = 850

 Score =  109 bits (273), Expect = 2e-22
 Identities = 59/147 (40%), Positives = 80/147 (54%), Gaps = 27/147 (18%)
 Frame = +1

Query: 4   YNKLGENFRKCLLCLSIFPQGSIIKKRTIIYWWIGEGFVKATAEKTAEEVGEKWFNDLVE 183
           Y  L    + CLLC +IFP+ +II KR +IYWWIGEGFV+ T EKTAEE+GE++F  L++
Sbjct: 152 YTILDLPLKMCLLCFAIFPEKAIIMKRQLIYWWIGEGFVRKTKEKTAEEMGEEYFQKLID 211

Query: 184 GNWIHPAKNKS---------------------------SKVVREFTMDPWVRWLVIYLAR 282
              I+P   K+                           S VV   TM PW+R +VI +A+
Sbjct: 212 MGLIYPKYKKAKQYKKAKQDKKESPESPESPESPESPESPVVDSCTMHPWIRRMVITVAK 271

Query: 283 QECFFDLDETGMPSSYLIKSSRACLLK 363
           +  FFDLD  G P++   +S R C  K
Sbjct: 272 KAEFFDLDRRGAPTAVSSQSRRICFAK 298


>ref|NP_001044526.1| Os01g0799000 [Oryza sativa Japonica Group]
           gi|20804725|dbj|BAB92411.1| NBS-LRR resistance protein
           RGH1-like [Oryza sativa Japonica Group]
           gi|113534057|dbj|BAF06440.1| Os01g0799000 [Oryza sativa
           Japonica Group] gi|125528035|gb|EAY76149.1| hypothetical
           protein OsI_04081 [Oryza sativa Indica Group]
           gi|125572320|gb|EAZ13835.1| hypothetical protein
           OsJ_03759 [Oryza sativa Japonica Group]
          Length = 627

 Score =  107 bits (266), Expect = 1e-21
 Identities = 55/138 (39%), Positives = 82/138 (59%)
 Frame = +1

Query: 4   YNKLGENFRKCLLCLSIFPQGSIIKKRTIIYWWIGEGFVKATAEKTAEEVGEKWFNDLVE 183
           Y+ L    + CLLC SIFP+ SII KR +I+WWIGEG V AT  +TAE+VG+  F+ L+ 
Sbjct: 163 YDNLDLQLKLCLLCFSIFPENSIISKRAMIHWWIGEGLVAATRNQTAEDVGKDCFDKLIA 222

Query: 184 GNWIHPAKNKSSKVVREFTMDPWVRWLVIYLARQECFFDLDETGMPSSYLIKSSRACLLK 363
            + I     K S  V E  + PW+R ++I +AR+  FF+ D  G  +     + RACL++
Sbjct: 223 RDMIEAVHVKRSCSVSECKLHPWIRRMLITVARKAQFFEFDSEGNATWDFSGTHRACLVE 282

Query: 364 MDKPESNPSTLREQGHSN 417
             K E   S ++ Q +++
Sbjct: 283 EYKQEIEISPVKNQPNTD 300


>tpg|DAA57255.1| TPA: hypothetical protein ZEAMMB73_808803 [Zea mays]
          Length = 622

 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/132 (39%), Positives = 78/132 (59%)
 Frame = +1

Query: 4   YNKLGENFRKCLLCLSIFPQGSIIKKRTIIYWWIGEGFVKATAEKTAEEVGEKWFNDLVE 183
           Y+ L    + CLLC S+FP+ SII KR +I+WWIGEG V AT  +TAE+VG+  F  L+ 
Sbjct: 163 YDNLDLQLKLCLLCFSVFPENSIISKRAMIHWWIGEGLVAATRSQTAEDVGKACFEKLIA 222

Query: 184 GNWIHPAKNKSSKVVREFTMDPWVRWLVIYLARQECFFDLDETGMPSSYLIKSSRACLLK 363
              I P   K    V +  + PW+R ++I +A+Q  FF+ D  G  +     + RACL++
Sbjct: 223 LEMIEPVYQKCRYGVNQCKLHPWIRRMLIKVAKQARFFEFDSDGNATWDCSATHRACLVE 282

Query: 364 MDKPESNPSTLR 399
             + E + ++LR
Sbjct: 283 EHQQEIDVASLR 294


>ref|XP_002325848.1| predicted protein [Populus trichocarpa] gi|222862723|gb|EEF00230.1|
           predicted protein [Populus trichocarpa]
          Length = 716

 Score =  106 bits (264), Expect = 2e-21
 Identities = 56/127 (44%), Positives = 77/127 (60%), Gaps = 4/127 (3%)
 Frame = +1

Query: 22  NFRKCLLCLSIFPQGSIIKKRTIIYWWIGEGFVKATAEKTAEEVGEKWFNDLVEGNWI-- 195
           + + C L LS+FP+ ++IKKR +IYWW+GEG + A  +KTAEE GE  F +L+E + I  
Sbjct: 179 DLKLCFLFLSVFPEEAVIKKRPLIYWWMGEGLITANEKKTAEEEGESVFQELIELDLILP 238

Query: 196 -HPAKNKSSKVVREFTMDPWVRWLVIYLARQECFFDLDETGMPSSYLIKSSRACL-LKMD 369
            H   +K S VV   TM PW+R + I LA++   F  D +G PS    +S RACL L  D
Sbjct: 239 YHERPDKPSPVVNACTMHPWIRHMAISLAQKADLFGFDSSGTPSYVNDRSRRACLVLSSD 298

Query: 370 KPESNPS 390
              S P+
Sbjct: 299 TSGSTPN 305


Top