BLASTX nr result

ID: Coptis24_contig00039533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039533
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298417.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002269242.2| PREDICTED: LRR receptor-like serine/threonin...    64   1e-08
emb|CAN71011.1| hypothetical protein VITISV_002381 [Vitis vinifera]    62   6e-08
ref|XP_003632938.1| PREDICTED: LRR receptor-like serine/threonin...    61   1e-07
ref|XP_002267646.2| PREDICTED: LRR receptor-like serine/threonin...    60   2e-07

>ref|XP_002298417.1| predicted protein [Populus trichocarpa] gi|222845675|gb|EEE83222.1|
           predicted protein [Populus trichocarpa]
          Length = 913

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/47 (61%), Positives = 36/47 (76%)
 Frame = +1

Query: 70  SGKIPFEGQMTTFDASAFSGNLRLCGPPLSTKCDGTASDKGGTTEVD 210
           SG IP+ GQMTTF+AS+FSGN  LCGPPL  +C G  S KGGT+ ++
Sbjct: 820 SGMIPYRGQMTTFEASSFSGNPGLCGPPLVLQCQGDDSGKGGTSTIE 866


>ref|XP_002269242.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
            GSO1-like [Vitis vinifera]
          Length = 1082

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/50 (62%), Positives = 35/50 (70%)
 Frame = +1

Query: 67   FSGKIPFEGQMTTFDASAFSGNLRLCGPPLSTKCDGTASDKGGTTEVDFT 216
            FSG+IPF GQMTTF A+AF+GN  LCG PL TKC    SDKG +   D T
Sbjct: 974  FSGQIPFMGQMTTFTATAFAGNPNLCGAPLVTKCQDEGSDKGQSDVEDET 1023


>emb|CAN71011.1| hypothetical protein VITISV_002381 [Vitis vinifera]
          Length = 974

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/48 (62%), Positives = 31/48 (64%)
 Frame = +1

Query: 67   FSGKIPFEGQMTTFDASAFSGNLRLCGPPLSTKCDGTASDKGGTTEVD 210
            FSG IPF GQMTTF+AS F GN  LCG PL TKC G   D G    VD
Sbjct: 866  FSGVIPFIGQMTTFNASVFDGNPGLCGAPLDTKCQGEGIDGGQKNVVD 913


>ref|XP_003632938.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
            GSO1-like [Vitis vinifera]
          Length = 1045

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/48 (62%), Positives = 31/48 (64%)
 Frame = +1

Query: 67   FSGKIPFEGQMTTFDASAFSGNLRLCGPPLSTKCDGTASDKGGTTEVD 210
            FSGKIPF GQMTTFD  AF GN  LCG PL  KC    SDK  +T  D
Sbjct: 926  FSGKIPFTGQMTTFDELAFDGNPGLCGAPLVEKCQDEDSDKEHSTGTD 973


>ref|XP_002267646.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
            FLS2-like [Vitis vinifera]
          Length = 1016

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/48 (60%), Positives = 31/48 (64%)
 Frame = +1

Query: 67   FSGKIPFEGQMTTFDASAFSGNLRLCGPPLSTKCDGTASDKGGTTEVD 210
            FSG IPF G+MTTF+AS F GN  LCG PL TKC G   D G    VD
Sbjct: 908  FSGVIPFIGKMTTFNASVFDGNPGLCGAPLDTKCQGEGIDGGQKNVVD 955


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