BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039529
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515948.1| pentatricopeptide repeat-containing protein,...   161   6e-38
ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containi...   158   5e-37
emb|CAN82028.1| hypothetical protein VITISV_000613 [Vitis vinifera]   156   1e-36
ref|XP_003594555.1| Pentatricopeptide repeat-containing protein ...   154   6e-36
ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containi...   152   2e-35

>ref|XP_002515948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544853|gb|EEF46368.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 706

 Score =  161 bits (407), Expect = 6e-38
 Identities = 75/97 (77%), Positives = 85/97 (87%)
 Frame = -1

Query: 291 EKVEQAYKVFADMKRKHCEPDEYTYTIMIRMIGKTGKADECLALFQEMLTKGCAPNQIAY 112
           +KV+QA+KVF DMK+KHCEPDEYTYTIMIRM G+ GK DE LALF+EML KGC+PN IAY
Sbjct: 91  QKVDQAFKVFEDMKKKHCEPDEYTYTIMIRMTGRIGKLDESLALFEEMLNKGCSPNLIAY 150

Query: 111 NTMIQALAKNRMVDKVIFLFSKMIENGCQPNEFTYSV 1
           NTMIQALA +RMVDK I LFSKM+E  C+PNEFTYSV
Sbjct: 151 NTMIQALANSRMVDKTILLFSKMMEKNCRPNEFTYSV 187



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 35/96 (36%), Positives = 55/96 (57%)
 Frame = -1

Query: 288 KVEQAYKVFADMKRKHCEPDEYTYTIMIRMIGKTGKADECLALFQEMLTKGCAPNQIAYN 109
           KV +A K+F +++   C+PD  +Y  +I  +GK G  DE    F+EM  KG  P+ + Y+
Sbjct: 334 KVYEAIKIFEELENSDCKPDIISYNSLINCLGKNGDLDEAHIRFREMQEKGLNPDVVTYS 393

Query: 108 TMIQALAKNRMVDKVIFLFSKMIENGCQPNEFTYSV 1
           T+I+   K   V+    LF +M+  GC PN  TY++
Sbjct: 394 TLIECFGKTDKVEMACRLFDEMLAEGCFPNIVTYNI 429



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 33/95 (34%), Positives = 55/95 (57%)
 Frame = -1

Query: 285 VEQAYKVFADMKRKHCEPDEYTYTIMIRMIGKTGKADECLALFQEMLTKGCAPNQIAYNT 106
           +++A+  F +M+ K   PD  TY+ +I   GKT K +    LF EML +GC PN + YN 
Sbjct: 370 LDEAHIRFREMQEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCFPNIVTYNI 429

Query: 105 MIQALAKNRMVDKVIFLFSKMIENGCQPNEFTYSV 1
           ++  L ++    + + L++K+ + G  P+  TYSV
Sbjct: 430 LLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYSV 464



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/96 (34%), Positives = 53/96 (55%)
 Frame = -1

Query: 291 EKVEQAYKVFADMKRKHCEPDEYTYTIMIRMIGKTGKADECLALFQEMLTKGCAPNQIAY 112
           +++   Y ++  MK     PD +TY I+I   G+ GK  E + +F+E+    C P+ I+Y
Sbjct: 298 KQISHLYDLYEKMKLDGPLPDIFTYNILISSFGRAGKVYEAIKIFEELENSDCKPDIISY 357

Query: 111 NTMIQALAKNRMVDKVIFLFSKMIENGCQPNEFTYS 4
           N++I  L KN  +D+    F +M E G  P+  TYS
Sbjct: 358 NSLINCLGKNGDLDEAHIRFREMQEKGLNPDVVTYS 393



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 26/93 (27%), Positives = 51/93 (54%)
 Frame = -1

Query: 282 EQAYKVFADMKRKHCEPDEYTYTIMIRMIGKTGKADECLALFQEMLTKGCAPNQIAYNTM 103
           +  ++V+ +MKRK    D + + +++  + K  K D+   +F++M  K C P++  Y  M
Sbjct: 59  DNGFRVYLEMKRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIM 118

Query: 102 IQALAKNRMVDKVIFLFSKMIENGCQPNEFTYS 4
           I+   +   +D+ + LF +M+  GC PN   Y+
Sbjct: 119 IRMTGRIGKLDESLALFEEMLNKGCSPNLIAYN 151


>ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710
           [Vitis vinifera]
          Length = 990

 Score =  158 bits (399), Expect = 5e-37
 Identities = 76/96 (79%), Positives = 80/96 (83%)
 Frame = -1

Query: 288 KVEQAYKVFADMKRKHCEPDEYTYTIMIRMIGKTGKADECLALFQEMLTKGCAPNQIAYN 109
           KV+Q Y VF DMKRKHCEPDEYTYTIMIRM GK GKADE L LFQEM  KG  PN IAYN
Sbjct: 92  KVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYN 151

Query: 108 TMIQALAKNRMVDKVIFLFSKMIENGCQPNEFTYSV 1
           TMIQALA NRMVDK IFLFSKM+EN C+PN FT+SV
Sbjct: 152 TMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSV 187



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 33/96 (34%), Positives = 57/96 (59%)
 Frame = -1

Query: 288 KVEQAYKVFADMKRKHCEPDEYTYTIMIRMIGKTGKADECLALFQEMLTKGCAPNQIAYN 109
           +VE+A K+F +++   C+PD  ++  +I  +GK G  DE    F+EM  +G +P+ + Y+
Sbjct: 334 RVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYS 393

Query: 108 TMIQALAKNRMVDKVIFLFSKMIENGCQPNEFTYSV 1
           T+I+   K   V+    LF +M+  GC PN  TY++
Sbjct: 394 TLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNI 429



 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 31/95 (32%), Positives = 56/95 (58%)
 Frame = -1

Query: 285 VEQAYKVFADMKRKHCEPDEYTYTIMIRMIGKTGKADECLALFQEMLTKGCAPNQIAYNT 106
           +++A+  F +M+ +   PD  TY+ +I   GKT K +    LF EML +GC+PN + YN 
Sbjct: 370 IDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNI 429

Query: 105 MIQALAKNRMVDKVIFLFSKMIENGCQPNEFTYSV 1
           ++  L ++    + + L++K+ + G  P+  TY+V
Sbjct: 430 LLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAV 464



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 30/96 (31%), Positives = 54/96 (56%)
 Frame = -1

Query: 291 EKVEQAYKVFADMKRKHCEPDEYTYTIMIRMIGKTGKADECLALFQEMLTKGCAPNQIAY 112
           +K    + ++  MK+    PD ++Y I+I   G+ G+ +E + +F+E+    C P+ I++
Sbjct: 298 KKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISF 357

Query: 111 NTMIQALAKNRMVDKVIFLFSKMIENGCQPNEFTYS 4
           N++I  L KN  +D+    F +M E G  P+  TYS
Sbjct: 358 NSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYS 393


>emb|CAN82028.1| hypothetical protein VITISV_000613 [Vitis vinifera]
          Length = 790

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/96 (78%), Positives = 80/96 (83%)
 Frame = -1

Query: 288 KVEQAYKVFADMKRKHCEPDEYTYTIMIRMIGKTGKADECLALFQEMLTKGCAPNQIAYN 109
           +V+Q Y VF DMKRKHCEPDEYTYTIMIRM GK GKADE L LFQEM  KG  PN IAYN
Sbjct: 307 EVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYN 366

Query: 108 TMIQALAKNRMVDKVIFLFSKMIENGCQPNEFTYSV 1
           TMIQALA NRMVDK IFLFSKM+EN C+PN FT+SV
Sbjct: 367 TMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSV 402



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 33/96 (34%), Positives = 57/96 (59%)
 Frame = -1

Query: 288 KVEQAYKVFADMKRKHCEPDEYTYTIMIRMIGKTGKADECLALFQEMLTKGCAPNQIAYN 109
           +VE+A K+F +++   C+PD  ++  +I  +GK G  DE    F+EM  +G +P+ + Y+
Sbjct: 551 RVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYS 610

Query: 108 TMIQALAKNRMVDKVIFLFSKMIENGCQPNEFTYSV 1
           T+I+   K   V+    LF +M+  GC PN  TY++
Sbjct: 611 TLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNI 646



 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 31/95 (32%), Positives = 56/95 (58%)
 Frame = -1

Query: 285 VEQAYKVFADMKRKHCEPDEYTYTIMIRMIGKTGKADECLALFQEMLTKGCAPNQIAYNT 106
           +++A+  F +M+ +   PD  TY+ +I   GKT K +    LF EML +GC+PN + YN 
Sbjct: 587 IDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNI 646

Query: 105 MIQALAKNRMVDKVIFLFSKMIENGCQPNEFTYSV 1
           ++  L ++    + + L++K+ + G  P+  TY+V
Sbjct: 647 LLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAV 681



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 30/96 (31%), Positives = 54/96 (56%)
 Frame = -1

Query: 291 EKVEQAYKVFADMKRKHCEPDEYTYTIMIRMIGKTGKADECLALFQEMLTKGCAPNQIAY 112
           +K    + ++  MK+    PD ++Y I+I   G+ G+ +E + +F+E+    C P+ I++
Sbjct: 515 KKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISF 574

Query: 111 NTMIQALAKNRMVDKVIFLFSKMIENGCQPNEFTYS 4
           N++I  L KN  +D+    F +M E G  P+  TYS
Sbjct: 575 NSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYS 610


>ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355483603|gb|AES64806.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  154 bits (390), Expect = 6e-36
 Identities = 73/97 (75%), Positives = 81/97 (83%)
 Frame = -1

Query: 291 EKVEQAYKVFADMKRKHCEPDEYTYTIMIRMIGKTGKADECLALFQEMLTKGCAPNQIAY 112
           +KV++AYKVF DMKR+HCEPD +TYTIMIRM GK GK DE LALFQ ML KG   N IAY
Sbjct: 237 QKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAY 296

Query: 111 NTMIQALAKNRMVDKVIFLFSKMIENGCQPNEFTYSV 1
           NTMI+ALAK RM DK + LFSKM+ENGCQPNEFTYSV
Sbjct: 297 NTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSV 333



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 35/96 (36%), Positives = 56/96 (58%)
 Frame = -1

Query: 288 KVEQAYKVFADMKRKHCEPDEYTYTIMIRMIGKTGKADECLALFQEMLTKGCAPNQIAYN 109
           +V+ A K+F +++  +C+PD  +Y  +I  +GK G  DE    F+EM  KG  P+ + Y+
Sbjct: 480 RVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYS 539

Query: 108 TMIQALAKNRMVDKVIFLFSKMIENGCQPNEFTYSV 1
           T+I+   K   V+    LF +MI  GC PN  TY++
Sbjct: 540 TLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNI 575



 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 32/95 (33%), Positives = 57/95 (60%)
 Frame = -1

Query: 285 VEQAYKVFADMKRKHCEPDEYTYTIMIRMIGKTGKADECLALFQEMLTKGCAPNQIAYNT 106
           V++A+  F +M+ K   PD  TY+ +I   GKT K +   +LF EM+ +GC+PN + YN 
Sbjct: 516 VDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNI 575

Query: 105 MIQALAKNRMVDKVIFLFSKMIENGCQPNEFTYSV 1
           ++  L ++    + + L++K+ + G  P+  TY+V
Sbjct: 576 LLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAV 610



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/96 (34%), Positives = 54/96 (56%)
 Frame = -1

Query: 291 EKVEQAYKVFADMKRKHCEPDEYTYTIMIRMIGKTGKADECLALFQEMLTKGCAPNQIAY 112
           ++V   + ++  MK+    PD +TY I+I   G+ G+ D  + +F+E+    C P+ I+Y
Sbjct: 444 KQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISY 503

Query: 111 NTMIQALAKNRMVDKVIFLFSKMIENGCQPNEFTYS 4
           N++I  L KN  VD+    F +M E G  P+  TYS
Sbjct: 504 NSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYS 539


>ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
           mitochondrial-like [Cucumis sativus]
          Length = 685

 Score =  152 bits (385), Expect = 2e-35
 Identities = 70/97 (72%), Positives = 83/97 (85%)
 Frame = -1

Query: 291 EKVEQAYKVFADMKRKHCEPDEYTYTIMIRMIGKTGKADECLALFQEMLTKGCAPNQIAY 112
           E+++++YKVF DMK KHC PDEYTYTIMIRM GK G+A+E LALF+EMLTKGC PN IAY
Sbjct: 283 EQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAY 342

Query: 111 NTMIQALAKNRMVDKVIFLFSKMIENGCQPNEFTYSV 1
           NTMIQAL+K+ MVDK I LF  MI+N C+PNEFTYS+
Sbjct: 343 NTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSI 379



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/96 (37%), Positives = 55/96 (57%)
 Frame = -1

Query: 288 KVEQAYKVFADMKRKHCEPDEYTYTIMIRMIGKTGKADECLALFQEMLTKGCAPNQIAYN 109
           KV++A +VF +++   C+PD  +Y  +I  +GK G  DE    F EM  KG  P+ + Y+
Sbjct: 526 KVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYS 585

Query: 108 TMIQALAKNRMVDKVIFLFSKMIENGCQPNEFTYSV 1
           T+I+   K   V+    LF +MI  GC PN  TY++
Sbjct: 586 TLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNI 621



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 32/95 (33%), Positives = 55/95 (57%)
 Frame = -1

Query: 285 VEQAYKVFADMKRKHCEPDEYTYTIMIRMIGKTGKADECLALFQEMLTKGCAPNQIAYNT 106
           V++A+  F +M+ K   PD  TY+ +I   GKT K +   +LF  M+T+GC PN + YN 
Sbjct: 562 VDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNI 621

Query: 105 MIQALAKNRMVDKVIFLFSKMIENGCQPNEFTYSV 1
           ++  L +     + + L++K+ E G  P+  TY++
Sbjct: 622 LLDCLERAGRTAETVDLYAKLREQGLTPDSITYAI 656



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/96 (34%), Positives = 56/96 (58%)
 Frame = -1

Query: 291 EKVEQAYKVFADMKRKHCEPDEYTYTIMIRMIGKTGKADECLALFQEMLTKGCAPNQIAY 112
           ++V   + ++  MK+    PD +TY I+I  +G+ GK  E + +F+E+ +  C P+ I+Y
Sbjct: 490 KQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISY 549

Query: 111 NTMIQALAKNRMVDKVIFLFSKMIENGCQPNEFTYS 4
           N++I  L KN  VD+    F +M + G  P+  TYS
Sbjct: 550 NSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYS 585



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/93 (25%), Positives = 48/93 (51%)
 Frame = -1

Query: 282 EQAYKVFADMKRKHCEPDEYTYTIMIRMIGKTGKADECLALFQEMLTKGCAPNQIAYNTM 103
           ++A+ V+ +M     + D + Y +++  + K  + D    +F++M  K C P++  Y  M
Sbjct: 251 DRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIM 310

Query: 102 IQALAKNRMVDKVIFLFSKMIENGCQPNEFTYS 4
           I+   K    ++ + LF +M+  GC PN   Y+
Sbjct: 311 IRMTGKMGRAEESLALFEEMLTKGCTPNLIAYN 343