BLASTX nr result

ID: Coptis24_contig00039524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039524
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273648.2| PREDICTED: LOB domain-containing protein 12-...   189   2e-46
ref|XP_002520780.1| LOB domain-containing protein, putative [Ric...   181   5e-44
ref|XP_002311246.1| predicted protein [Populus trichocarpa] gi|2...   181   7e-44
emb|CBI25425.3| unnamed protein product [Vitis vinifera]              179   2e-43
ref|XP_002316191.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43

>ref|XP_002273648.2| PREDICTED: LOB domain-containing protein 12-like [Vitis vinifera]
          Length = 212

 Score =  189 bits (480), Expect = 2e-46
 Identities = 91/108 (84%), Positives = 96/108 (88%)
 Frame = +2

Query: 35  PVPSFQQTNFLPSFLRDFQHQNMGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIV 214
           P PSF   + L +FL      +MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKF+IV
Sbjct: 20  PQPSFSNPSSLLAFLPRSSPSSMGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFSIV 79

Query: 215 HKVFGASNVSKMLQELPIHQRADAVSSLVYEANARVRDPVYGCVGAIS 358
           HKVFGASNVSKMLQELP+HQRADAVSSLVYEANARVRDPVYGCVGAIS
Sbjct: 80  HKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAIS 127


>ref|XP_002520780.1| LOB domain-containing protein, putative [Ricinus communis]
           gi|223539911|gb|EEF41489.1| LOB domain-containing
           protein, putative [Ricinus communis]
          Length = 173

 Score =  181 bits (459), Expect = 5e-44
 Identities = 86/86 (100%), Positives = 86/86 (100%)
 Frame = +2

Query: 101 MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPIHQRA 280
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPIHQRA
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPIHQRA 60

Query: 281 DAVSSLVYEANARVRDPVYGCVGAIS 358
           DAVSSLVYEANARVRDPVYGCVGAIS
Sbjct: 61  DAVSSLVYEANARVRDPVYGCVGAIS 86


>ref|XP_002311246.1| predicted protein [Populus trichocarpa] gi|222851066|gb|EEE88613.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score =  181 bits (458), Expect = 7e-44
 Identities = 85/86 (98%), Positives = 86/86 (100%)
 Frame = +2

Query: 101 MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPIHQRA 280
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELP+HQRA
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVHQRA 60

Query: 281 DAVSSLVYEANARVRDPVYGCVGAIS 358
           DAVSSLVYEANARVRDPVYGCVGAIS
Sbjct: 61  DAVSSLVYEANARVRDPVYGCVGAIS 86


>emb|CBI25425.3| unnamed protein product [Vitis vinifera]
          Length = 126

 Score =  179 bits (455), Expect = 2e-43
 Identities = 84/86 (97%), Positives = 86/86 (100%)
 Frame = +2

Query: 101 MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPIHQRA 280
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKF+IVHKVFGASNVSKMLQELP+HQRA
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFSIVHKVFGASNVSKMLQELPVHQRA 60

Query: 281 DAVSSLVYEANARVRDPVYGCVGAIS 358
           DAVSSLVYEANARVRDPVYGCVGAIS
Sbjct: 61  DAVSSLVYEANARVRDPVYGCVGAIS 86


>ref|XP_002316191.1| predicted protein [Populus trichocarpa] gi|222865231|gb|EEF02362.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score =  179 bits (455), Expect = 2e-43
 Identities = 84/86 (97%), Positives = 86/86 (100%)
 Frame = +2

Query: 101 MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPIHQRA 280
           MGGNSPCASCKLLRRRCAKDCIF+PYFPSDDPHKFAIVHKVFGASNVSKMLQELP+HQRA
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFSPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVHQRA 60

Query: 281 DAVSSLVYEANARVRDPVYGCVGAIS 358
           DAVSSLVYEANARVRDPVYGCVGAIS
Sbjct: 61  DAVSSLVYEANARVRDPVYGCVGAIS 86


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