BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039517
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631249.1| PREDICTED: U-box domain-containing protein 2...   125   3e-27
ref|XP_002533776.1| ubiquitin-protein ligase, putative [Ricinus ...   115   4e-24
gb|ADI46213.1| CMPG1a [Nicotiana benthamiana]                         112   3e-23
gb|ADI46217.1| CMPG1b [Solanum tuberosum]                             112   4e-23
gb|ADI46216.1| CMPG1a [Solanum tuberosum]                             112   4e-23

>ref|XP_003631249.1| PREDICTED: U-box domain-containing protein 21-like [Vitis vinifera]
          Length = 442

 Score =  125 bits (315), Expect = 3e-27
 Identities = 65/100 (65%), Positives = 83/100 (83%), Gaps = 3/100 (3%)
 Frame = -2

Query: 299 PICPASTKASLMVIYYLVSTSSEH---KSKFAKMGLVSLLIEILVDSSDRSICEKALAVL 129
           PICP +TK SL+VI+++VS+S  +   K +F +MGLV LL+E+LVDS ++S+CEKAL VL
Sbjct: 270 PICPTATKTSLVVIFHMVSSSPSNEDTKVRFVEMGLVELLLELLVDS-EKSVCEKALGVL 328

Query: 128 DEIFGCEEGRQVAYSHSLTMPVLVKKLIRVSVLATEFAVS 9
           D I GCEEGR+ AY H+LTMPVLVKKL+RVS LATEF+VS
Sbjct: 329 DGICGCEEGREKAYGHALTMPVLVKKLLRVSDLATEFSVS 368


>ref|XP_002533776.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223526297|gb|EEF28606.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 436

 Score =  115 bits (288), Expect = 4e-24
 Identities = 61/102 (59%), Positives = 82/102 (80%), Gaps = 3/102 (2%)
 Frame = -2

Query: 299 PICPASTKASLMVIYYLVSTSSEH---KSKFAKMGLVSLLIEILVDSSDRSICEKALAVL 129
           P+CP  TKASL+VI++L+S+ S     KS FAKMGLV L+I I++  S+RSICE AL VL
Sbjct: 266 PVCPKITKASLVVIFHLLSSHSSGGNIKSTFAKMGLVPLIIGIII-GSERSICEGALGVL 324

Query: 128 DEIFGCEEGRQVAYSHSLTMPVLVKKLIRVSVLATEFAVSAV 3
           D++  CEEGR+ AYS++LT PVLVKK++RVS LAT+++VSA+
Sbjct: 325 DKLCDCEEGREEAYSNALTWPVLVKKILRVSELATQYSVSAI 366


>gb|ADI46213.1| CMPG1a [Nicotiana benthamiana]
          Length = 444

 Score =  112 bits (280), Expect = 3e-23
 Identities = 61/106 (57%), Positives = 81/106 (76%), Gaps = 7/106 (6%)
 Frame = -2

Query: 299 PICPASTKASLMVIYYLVSTSSEH-------KSKFAKMGLVSLLIEILVDSSDRSICEKA 141
           PICP +TKASL+ IY++V+ S+         +S+FA MGLV LL+E+LVDS ++SICEKA
Sbjct: 267 PICPTTTKASLLAIYHMVNPSNSSSFANKKAQSRFADMGLVELLVEMLVDS-EKSICEKA 325

Query: 140 LAVLDEIFGCEEGRQVAYSHSLTMPVLVKKLIRVSVLATEFAVSAV 3
           L VLD I    EGR+  Y+++LT+PVLVKKL+RVS LATEF+VS +
Sbjct: 326 LGVLDGICSSVEGRKGVYNYALTVPVLVKKLLRVSDLATEFSVSII 371


>gb|ADI46217.1| CMPG1b [Solanum tuberosum]
          Length = 451

 Score =  112 bits (279), Expect = 4e-23
 Identities = 61/99 (61%), Positives = 79/99 (79%), Gaps = 2/99 (2%)
 Frame = -2

Query: 299 PICPASTKASLMVIYYLV--STSSEHKSKFAKMGLVSLLIEILVDSSDRSICEKALAVLD 126
           PICP +TKASL+ IY++V  S+S   +S+F  +GLV LLIE+LVD  D+SICEKAL VLD
Sbjct: 280 PICPNTTKASLLTIYHMVINSSSQSSRSRFVDVGLVELLIELLVDC-DKSICEKALGVLD 338

Query: 125 EIFGCEEGRQVAYSHSLTMPVLVKKLIRVSVLATEFAVS 9
            I   EEG + AY+++L++PVLVKKL+RVS LATEF+VS
Sbjct: 339 GILSYEEGVKRAYNYALSVPVLVKKLLRVSDLATEFSVS 377


>gb|ADI46216.1| CMPG1a [Solanum tuberosum]
          Length = 422

 Score =  112 bits (279), Expect = 4e-23
 Identities = 62/99 (62%), Positives = 78/99 (78%), Gaps = 2/99 (2%)
 Frame = -2

Query: 299 PICPASTKASLMVIYYLVSTSSEH--KSKFAKMGLVSLLIEILVDSSDRSICEKALAVLD 126
           PICP +TKASL+ IY++V  SS    +S+F  +GLV LLIEILVD  D+SICEKAL VLD
Sbjct: 251 PICPNTTKASLLTIYHMVINSSSQSLRSRFVDVGLVELLIEILVDC-DKSICEKALGVLD 309

Query: 125 EIFGCEEGRQVAYSHSLTMPVLVKKLIRVSVLATEFAVS 9
            I   EEG + AY+++L++PVLVKKL+RVS LATEF+VS
Sbjct: 310 GILSYEEGVKRAYNYALSVPVLVKKLLRVSDLATEFSVS 348